RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ABHD17AQ96GS6 310 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 PRRC1Q96M27 445 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 AGAP4Q96P64 663 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 PRSS27Q9BQR3 290 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 TIMMDC1Q9NPL8 285 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 PPP4R1LQ9P1A2 415 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 SLC35A3Q9Y2D2 325 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 PCNX3Q9H6A9 2034 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 A0A1W2PQD3 144 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 C7orf72A4D263 438 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 CYSRT1A8MQ03 144 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 H3BNH8 94 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 ZNF26P17031 533 aaPredicted RBP9.35□□□□□ -0.91
USP39-210ENST00000459775 POLR2IP36954 125 aaKnown RBP9.35□□□□□ -0.91
USP39-210ENST00000459775 LIMS1P48059 325 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 RRADP55042 308 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 AQP4P55087 323 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 ZIK1Q3SY52 487 aaPredicted RBP9.35□□□□□ -0.91
USP39-210ENST00000459775 Q6ZNX1 250 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 RTL4Q6ZR62 310 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 RANBP3LQ86VV4 465 aaPredicted RBP9.35□□□□□ -0.91
USP39-210ENST00000459775 CYP4Z1Q86W10 505 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 OR52M1Q8NGK5 317 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 MAGEE2Q8TD90 523 aaPredicted RBP9.35□□□□□ -0.91
USP39-210ENST00000459775 LIPHQ8WWY8 451 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 ZNF347Q96SE7 839 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 KCNJ15Q99712 375 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 GPA33Q99795 319 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 UTP23Q9BRU9 249 aaKnown RBP9.35□□□□□ -0.91
USP39-210ENST00000459775 OSBPL11Q9BXB4 747 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 LAT2Q9GZY6 243 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 ARMC7Q9H6L4 198 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 PALMDQ9NP74 551 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.35□□□□□ -0.91
USP39-210ENST00000459775 LRRC42Q9Y546 428 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 KLF2Q9Y5W3 355 aaPredicted RBP9.35□□□□□ -0.91
USP39-210ENST00000459775 WIF1Q9Y5W5 379 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 EML6Q6ZMW3 1958 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 HEATR5AQ86XA9 2040 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 A0A087WUU8 490 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 RAB19A4D1S5 217 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 LRRN3E7EW58 273 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 LINC01387J3KSC0 135 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 TP53I11O14683 189 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 PDGFAP04085 211 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 IGFBP1P08833 259 aaPredicted RBP9.34□□□□□ -0.91
USP39-210ENST00000459775 RFPL3SP0C7P2 107 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 DAPP51397 102 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 LUMP51884 338 aaPredicted RBP9.34□□□□□ -0.91
USP39-210ENST00000459775 SRSF1Q07955 248 aaKnown RBP eCLIP9.34□□□□□ -0.913e-6■■■■■ 29.6
USP39-210ENST00000459775 QPRTQ15274 297 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 COLEC12Q5KU26 742 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 IZUMO2Q6UXV1 221 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 ZDHHC13Q8IUH4 622 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 CMIPQ8IY22 773 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 OR5K1Q8NHB7 308 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 ZNF563Q8TA94 476 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 GPR119Q8TDV5 335 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
USP39-210ENST00000459775 FEVQ99581 238 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 NIPSNAP1Q9BPW8 284 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 FUZQ9BT04 418 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 C20orf141Q9NUB4 165 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 PIEZO2Q9H5I5 2752 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 EXPH5Q8NEV8 1989 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 FLNBO75369 2602 aaKnown RBP9.34□□□□□ -0.91
USP39-210ENST00000459775 A0A0B4J2E0 115 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 A0A1B0GX12 115 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 TRAPPC13A5PLN9 417 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 EFCAB10A6NFE3 127 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 ATP6V1G2-DDX39BF2Z307 99 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 DLGAP1O14490 977 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 ADAMDEC1O15204 470 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 PTP4A3O75365 173 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 SLC25A12O75746 678 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 GASTP01350 101 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 CHMP24386 653 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 EPHA2P29317 976 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 TACR3P29371 465 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 RAB4BP61018 213 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 ALG10BQ5I7T1 473 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 C1QL3Q5VWW1 255 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 USP43Q70EL4 1123 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 ZNF550Q7Z398 422 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 PRICKLE2Q7Z3G6 844 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 BTLAQ7Z6A9 289 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 CROCCP3Q8IVE0 287 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 OFCC1Q8IZS5 231 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 MINDY2Q8NBR6 621 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 OR52N1Q8NH53 320 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 OR5W2Q8NH69 310 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 PFN4Q8NHR9 129 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 FNDC8Q8TC99 324 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 EXTL1Q92935 676 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 C3orf49Q96BT1 292 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 ZNF559Q9BR84 538 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 ANGPTL4Q9BY76 406 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 TMEM27Q9HBJ8 222 aa9.34□□□□□ -0.91
USP39-210ENST00000459775 VSX1Q9NZR4 365 aaPredicted RBP9.34□□□□□ -0.91
USP39-210ENST00000459775 TESQ9UGI8 421 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms