RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 B3GALT5Q9Y2C3 310 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 CORINQ9Y5Q5 1042 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 CIB4A0PJX0 185 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 CXCR6O00574 342 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 GMNNO75496 209 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 ZNF43P17038 809 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 DNASE1P24855 282 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 OR1E2P47887 323 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 IST1P53990 364 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 NR1H2P55055 460 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 TTC33Q6PID6 262 aaPredicted RBP18.28■□□□□ 0.52
VARS-218ENST00000459667 PGAM4Q8N0Y7 254 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 ADPRHL1Q8NDY3 354 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 PLPPR2Q96GM1 343 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 SLC41A3Q96GZ6 507 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 MPP4Q96JB8 637 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 OXGR1Q96P68 337 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 MOGAT1Q96PD6 335 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 ASPNQ9BXN1 380 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 SLCO5A1Q9H2Y9 848 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 B3GAT1Q9P2W7 334 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 PRR14LQ5THK1 2151 aa18.28■□□□□ 0.52
VARS-218ENST00000459667 PDLIM1O00151 329 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 RAF1P04049 648 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 ITGA5P08648 1049 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 NQO1P15559 274 aaKnown RBP18.27■□□□□ 0.52
VARS-218ENST00000459667 SELENOPP49908 381 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 FOXG1P55316 489 aaPredicted RBP18.27■□□□□ 0.52
VARS-218ENST00000459667 TAS2R41P59536 307 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 SELENOWP63302 87 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 IL1RL1Q01638 556 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 LTBQ06643 244 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 C1DQ13901 141 aaKnown RBP18.27■□□□□ 0.52
VARS-218ENST00000459667 PPA1Q15181 289 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 TIMM23BQ5SRD1 257 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 NIPAL3Q6P499 406 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 POMGNT2Q8NAT1 580 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 NSL1Q96IY1 281 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 POLR2J2Q9GZM3 115 aaKnown RBP18.27■□□□□ 0.52
VARS-218ENST00000459667 POLR2J3Q9H1A7 115 aaKnown RBP18.27■□□□□ 0.52
VARS-218ENST00000459667 NGBQ9NPG2 151 aa18.27■□□□□ 0.52
VARS-218ENST00000459667 CCM2LQ9NUG4 571 aaPredicted RBP18.27■□□□□ 0.52
VARS-218ENST00000459667 OR5H1A6NKK0 313 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 LRRN3E7EW58 273 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 KPNA4O00629 521 aaPredicted RBP18.26■□□□□ 0.51
VARS-218ENST00000459667 MT-ATP6P00846 226 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 CLDN17P56750 224 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 PMS2P3Q13401 168 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 KEAP1Q14145 624 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 C9orf135Q5VTT2 229 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 P2RY8Q86VZ1 359 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 SCAIQ8N9R8 606 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 FAM162AQ96A26 154 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 MUCL1Q96DR8 90 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 PRSS27Q9BQR3 290 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 ZNF426Q9BUY5 554 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 SLC19A3Q9BZV2 496 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 OTOGQ6ZRI0 2925 aa18.26■□□□□ 0.51
VARS-218ENST00000459667 KRT33AO76009 404 aa18.25■□□□□ 0.51
VARS-218ENST00000459667 OR5F1O95221 314 aa18.25■□□□□ 0.51
VARS-218ENST00000459667 ATE1O95260 518 aa18.25■□□□□ 0.51
VARS-218ENST00000459667 ZNF682O95780 498 aa18.25■□□□□ 0.51
VARS-218ENST00000459667 ART1P52961 327 aa18.25■□□□□ 0.51
VARS-218ENST00000459667 PIN1Q13526 163 aaPredicted RBP18.25■□□□□ 0.51
VARS-218ENST00000459667 SAMD4BQ5PRF9 694 aaKnown RBP18.25■□□□□ 0.51
VARS-218ENST00000459667 OR7E24Q6IFN5 339 aa18.25■□□□□ 0.51
VARS-218ENST00000459667 SEZ6L2Q6UXD5 910 aa18.25■□□□□ 0.51
VARS-218ENST00000459667 SSX8Q7RTT4 187 aa18.25■□□□□ 0.51
VARS-218ENST00000459667 ABHD12BQ7Z5M8 362 aaPredicted RBP18.25■□□□□ 0.51
VARS-218ENST00000459667 UBTD1Q9HAC8 227 aa18.25■□□□□ 0.51
VARS-218ENST00000459667 MRPL39Q9NYK5 338 aaKnown RBP18.25■□□□□ 0.51
VARS-218ENST00000459667 RCE1Q9Y256 329 aa18.25■□□□□ 0.51
VARS-218ENST00000459667 LOC102725191A0A1B0GVB3 256 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 OR6C65A6NJZ3 312 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 MS4A18H0YCH9 400 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 TRAF3IP2O43734 574 aaPredicted RBP18.24■□□□□ 0.51
VARS-218ENST00000459667 AKAP8O43823 692 aaKnown RBP18.24■□□□□ 0.51
VARS-218ENST00000459667 HPRP00739 348 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 CALB2P22676 271 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 MPGP29372 298 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 IFNA8P32881 189 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 SLC25A3Q00325 362 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 TGFBR3Q03167 851 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 LGALS3BPQ08380 585 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 PUDPQ08623 228 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 GABRA6Q16445 453 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 ZNF74Q16587 644 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 MS4A18Q3C1V0 323 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 ZNF704Q6ZNC4 412 aaPredicted RBP18.24■□□□□ 0.51
VARS-218ENST00000459667 VTCN1Q7Z7D3 282 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 UEVLDQ8IX04 471 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 C1orf162Q8NEQ5 155 aaPredicted RBP18.24■□□□□ 0.51
VARS-218ENST00000459667 OR5J2Q8NH18 312 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 OR52N5Q8NH56 324 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 MUS81Q96NY9 551 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 ALKBH3Q96Q83 286 aaPredicted RBP18.24■□□□□ 0.51
VARS-218ENST00000459667 AMBRA1Q9C0C7 1298 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 ESRP2Q9H6T0 727 aaKnown RBP18.24■□□□□ 0.51
VARS-218ENST00000459667 RIMS3Q9UJD0 308 aa18.24■□□□□ 0.51
VARS-218ENST00000459667 AKAP9Q99996 3911 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms