RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 PRKCDQ05655 676 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 CHRNB3Q05901 458 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 MS4A18Q3C1V0 323 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 FAM98BQ52LJ0 330 aaKnown RBP12.54□□□□□ -0.4
SMPD4-215ENST00000457039 TMEM225Q6GV28 225 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 PODNL1Q6PEZ8 512 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 TBPL2Q6SJ96 375 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 TFAP2EQ6VUC0 442 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 NHLRC1Q6VVB1 395 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 MBOAT2Q6ZWT7 520 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 CREB3L2Q70SY1 520 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 YTHDF3Q7Z739 585 aaKnown RBP12.54□□□□□ -0.4
SMPD4-215ENST00000457039 GALNT5Q7Z7M9 940 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 LUZP2Q86TE4 346 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 EPHX4Q8IUS5 362 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 NRMQ8IXM6 262 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 KDM8Q8N371 416 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 C10orf53Q8N6V4 93 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 LRRC17Q8N6Y2 441 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 ZNF610Q8N9Z0 462 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 OR5J2Q8NH18 312 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 CANT1Q8WVQ1 401 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 TMEM45BQ96B21 275 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 ZNF775Q96BV0 537 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-215ENST00000457039 SGTBQ96EQ0 304 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 ASPNQ9BXN1 380 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 NANSQ9NR45 359 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 TESMINQ9Y4I5 508 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 PTPN13Q12923 2485 aa12.54□□□□□ -0.4
SMPD4-215ENST00000457039 TRBV4-1A0A0J9YWV2 114 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 PRSS44E7EML9 344 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 PLPP3O14495 311 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 SMNDC1O75940 238 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMPD4-215ENST00000457039 OR7A10O76100 309 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 HPRP00739 348 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 TSPAN19P0C672 248 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 RRM2P31350 389 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 OR3A2P47893 321 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 LIMS1P48059 325 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 PCYT1AP49585 367 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 HMGA2P52926 109 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 GABPB1Q06547 395 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-215ENST00000457039 ZP4Q12836 540 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 PMS2P3Q13401 168 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 SEC23BQ15437 767 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 ZNF730Q6ZMV8 503 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 GPAT4Q86UL3 456 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 SPATA24Q86W54 205 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 RNASE6Q93091 150 aaKnown RBP12.53□□□□□ -0.4
SMPD4-215ENST00000457039 BPIFA2Q96DR5 249 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 OXGR1Q96P68 337 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 ZNF385AQ96PM9 386 aaKnown RBP12.53□□□□□ -0.4
SMPD4-215ENST00000457039 CHID1Q9BWS9 393 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 C12orf49Q9H741 205 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 TAS2R5Q9NYW4 299 aa12.53□□□□□ -0.4
SMPD4-215ENST00000457039 PLEKHB1Q9UF11 243 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-215ENST00000457039 HCFC1P51610 2035 aa12.52□□□□□ -0.4
SMPD4-215ENST00000457039 SH3PXD2BA1X283 911 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 TRAF3IP2O43734 574 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-215ENST00000457039 GADD45GO95257 159 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 IFI30P13284 250 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 HOXB6P17509 224 aaKnown RBP12.52□□□□□ -0.41
SMPD4-215ENST00000457039 FUT1P19526 365 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 MAKP20794 623 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 SMIM11AP58511 58 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 SPIBQ01892 262 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 PUDPQ08623 228 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 FGD3Q5JSP0 725 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 PAPD5Q8NDF8 572 aaKnown RBP12.52□□□□□ -0.41
SMPD4-215ENST00000457039 OR52J3Q8NH60 311 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 SLCO4A1Q96BD0 722 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 RBM24Q9BX46 236 aaKnown RBP12.52□□□□□ -0.41
SMPD4-215ENST00000457039 ENKD1Q9H0I2 346 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 GALNT8Q9NY28 637 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 C6orf203Q9P0P8 240 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-215ENST00000457039 FOXD3Q9UJU5 478 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-215ENST00000457039 NOSIPQ9Y314 301 aaKnown RBP12.52□□□□□ -0.41
SMPD4-215ENST00000457039 LYVE1Q9Y5Y7 322 aa12.52□□□□□ -0.41
SMPD4-215ENST00000457039 MRPL33O75394 65 aaKnown RBP12.51□□□□□ -0.41
SMPD4-215ENST00000457039 KRT36O76013 467 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 ZNF432O94892 652 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 HLA-DOBP13765 273 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 NQO1P15559 274 aaKnown RBP12.51□□□□□ -0.41
SMPD4-215ENST00000457039 ZNF43P17038 809 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 UQCRC1P31930 480 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 OMPP47874 163 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 RPS4XP62701 263 aaKnown RBP12.51□□□□□ -0.41
SMPD4-215ENST00000457039 FHL1Q13642 323 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 CCNIQ14094 377 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 C1orf146Q5VVC0 180 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 TMPRSS11FQ6ZWK6 438 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.51□□□□□ -0.41
SMPD4-215ENST00000457039 PXKQ7Z7A4 578 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 MEX3DQ86XN8 651 aaKnown RBP12.51□□□□□ -0.41
SMPD4-215ENST00000457039 GABRG1Q8N1C3 465 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 OR4K5Q8NGD3 323 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 OR4C15Q8NGM1 316 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 ALPK1Q96QP1 1244 aa12.51□□□□□ -0.41
SMPD4-215ENST00000457039 CCM2LQ9NUG4 571 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-215ENST00000457039 ELOVL5Q9NYP7 299 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms