RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ZNF417Q8TAU3 575 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 RNF217Q8TC41 542 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 PIK3IP1Q96FE7 263 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 HS3ST6Q96QI5 342 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 ZNF587Q96SQ5 575 aaPredicted RBP15.29■□□□□ 0.04
USP39-208ENST00000455732 SLC19A3Q9BZV2 496 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 SPAG4Q9NPE6 437 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 TAS2R16Q9NYV7 291 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 GMPR2Q9P2T1 348 aaKnown RBP15.29■□□□□ 0.04
USP39-208ENST00000455732 B3GAT1Q9P2W7 334 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 SEC14L4Q9UDX3 406 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 SH3GLB1Q9Y371 365 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 NF1P21359 2839 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 CXCR6O00574 342 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 OR5F1O95221 314 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 MT-ATP6P00846 226 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 IGHV3-9P01782 118 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 CD53P19397 219 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 GGT1P19440 569 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 NR1H2P55055 460 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 SELENOWP63302 87 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 TAB1Q15750 504 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 SEZ6L2Q6UXD5 910 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 AAED1Q7RTV5 226 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 P2RY8Q86VZ1 359 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 EPHX4Q8IUS5 362 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 POMGNT2Q8NAT1 580 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 LZICQ8WZA0 190 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 OXGR1Q96P68 337 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 CCT8L2Q96SF2 557 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 AMBRA1Q9C0C7 1298 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 SLCO5A1Q9H2Y9 848 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 MRPL39Q9NYK5 338 aaKnown RBP15.28■□□□□ 0.04
USP39-208ENST00000455732 SLC7A7Q9UM01 511 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 RCE1Q9Y256 329 aa15.28■□□□□ 0.04
USP39-208ENST00000455732 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.27■□□□□ 0.04
USP39-208ENST00000455732 OR6C65A6NJZ3 312 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 OR5H1A6NKK0 313 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 SHOX2O60902 331 aaPredicted RBP15.27■□□□□ 0.04
USP39-208ENST00000455732 FAM107AO95990 144 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 THRBP10828 461 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 ZNF43P17038 809 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 TNFRSF1BP20333 461 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 LTBQ06643 244 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 FAPQ12884 760 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 DEFB113Q30KQ7 82 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 TIMM23BQ5SRD1 257 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 TSPO2Q5TGU0 170 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 WFDC8Q8IUA0 241 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 C1orf162Q8NEQ5 155 aaPredicted RBP15.27■□□□□ 0.04
USP39-208ENST00000455732 MOGAT1Q96PD6 335 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 KCTD14Q9BQ13 255 aaPredicted RBP15.27■□□□□ 0.04
USP39-208ENST00000455732 PRSS27Q9BQR3 290 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 ASPNQ9BXN1 380 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 SLC7A10Q9NS82 523 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 TAGLN3Q9UI15 199 aa15.27■□□□□ 0.04
USP39-208ENST00000455732 GSTA4O15217 222 aa15.26■□□□□ 0.03
USP39-208ENST00000455732 IGF2P01344 180 aa15.26■□□□□ 0.03
USP39-208ENST00000455732 ITGA5P08648 1049 aa15.26■□□□□ 0.03
USP39-208ENST00000455732 RBM34P42696 430 aaKnown RBP15.26■□□□□ 0.03
USP39-208ENST00000455732 OR1E2P47887 323 aa15.26■□□□□ 0.03
USP39-208ENST00000455732 C1QTNF12Q5T7M4 302 aa15.26■□□□□ 0.03
USP39-208ENST00000455732 GKAP1Q5VSY0 366 aaPredicted RBP15.26■□□□□ 0.03
USP39-208ENST00000455732 OR7E24Q6IFN5 339 aa15.26■□□□□ 0.03
USP39-208ENST00000455732 TTC33Q6PID6 262 aaPredicted RBP15.26■□□□□ 0.03
USP39-208ENST00000455732 DEF8Q6ZN54 512 aa15.26■□□□□ 0.03
USP39-208ENST00000455732 CBLL1Q75N03 491 aa15.26■□□□□ 0.03
USP39-208ENST00000455732 TMEM204Q9BSN7 226 aa15.26■□□□□ 0.03
USP39-208ENST00000455732 FKRPQ9H9S5 495 aa15.26■□□□□ 0.03
USP39-208ENST00000455732 NGBQ9NPG2 151 aa15.26■□□□□ 0.03
USP39-208ENST00000455732 UPB1Q9UBR1 384 aa15.26■□□□□ 0.03
USP39-208ENST00000455732 TRAF3IP2O43734 574 aaPredicted RBP15.25■□□□□ 0.03
USP39-208ENST00000455732 ZNF432O94892 652 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 MPGP29372 298 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 SELENOPP49908 381 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 TAS2R41P59536 307 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 KRT72Q14CN4 511 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 PPA1Q15181 289 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 GABRA6Q16445 453 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 ZNF74Q16587 644 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 FXNQ16595 210 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 ABHD12BQ7Z5M8 362 aaPredicted RBP15.25■□□□□ 0.03
USP39-208ENST00000455732 PGAM4Q8N0Y7 254 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 KDM8Q8N371 416 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 C17orf78Q8N4C9 275 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 GEMIN6Q8WXD5 167 aaKnown RBP15.25■□□□□ 0.03
USP39-208ENST00000455732 PLPPR2Q96GM1 343 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 BOD1Q96IK1 185 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 TPD52L3Q96J77 140 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 PRRC1Q96M27 445 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 MUS81Q96NY9 551 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 LINC00470Q9BZP3 86 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 ARL8BQ9NVJ2 186 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 RIMS3Q9UJD0 308 aa15.25■□□□□ 0.03
USP39-208ENST00000455732 CIB4A0PJX0 185 aa15.24■□□□□ 0.03
USP39-208ENST00000455732 LRRN3E7EW58 273 aa15.24■□□□□ 0.03
USP39-208ENST00000455732 MS4A18H0YCH9 400 aa15.24■□□□□ 0.03
USP39-208ENST00000455732 PLPP3O14495 311 aa15.24■□□□□ 0.03
USP39-208ENST00000455732 AKAP8O43823 692 aaKnown RBP15.24■□□□□ 0.03
USP39-208ENST00000455732 RAD51DO75771 328 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms