RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 PRAMEF7Q5VXH5 474 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 ATG16L1Q676U5 607 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 TMEM225Q6GV28 225 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 ANKRD16Q6P6B7 361 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 MFSD8Q8NHS3 518 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 ITCHQ96J02 903 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 FKRPQ9H9S5 495 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 NOX3Q9HBY0 568 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 CA10Q9NS85 328 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 CALML5Q9NZT1 146 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 USH1CQ9Y6N9 552 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 ANK2Q01484 3957 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 TMEM129A0AVI4 362 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 RNF212BA8MTL3 300 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 MS4A18H0YCH9 400 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 RPL36A-HNRNPH2H7BZ11 118 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 CLIC1O00299 241 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 TRAF3IP2O43734 574 aaPredicted RBP13.92□□□□□ -0.18
GPC1-206ENST00000455111 ANP32DO95626 131 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 IGKV3-15P01624 115 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 ARAFP10398 606 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 HLA-DOBP13765 273 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 CLDN17P56750 224 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 ARF1P84077 181 aaKnown RBP13.92□□□□□ -0.18
GPC1-206ENST00000455111 ROR2Q01974 943 aaKnown RBP13.92□□□□□ -0.18
GPC1-206ENST00000455111 TGFBR3Q03167 851 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 MS4A18Q3C1V0 323 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 CHRFAM7AQ494W8 412 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 C6orf10Q5SRN2 563 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 IL17RELQ6ZVW7 336 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 TMEM123Q8N131 208 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 DEPDC4Q8N2C3 294 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 ZCCHC24Q8N2G6 241 aaKnown RBP13.92□□□□□ -0.18
GPC1-206ENST00000455111 MAGEE2Q8TD90 523 aaPredicted RBP13.92□□□□□ -0.18
GPC1-206ENST00000455111 PROX1Q92786 737 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 SLC25A36Q96CQ1 311 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 ZNF75AQ96N20 296 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 TAPBPLQ9BX59 468 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 SLCO1B3Q9NPD5 702 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 TMEM45AQ9NWC5 275 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 VAPAQ9P0L0 249 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 RASD1Q9Y272 281 aa13.92□□□□□ -0.18
GPC1-206ENST00000455111 A0A1B0GWA3 101 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 ZNF587BE7ETH6 402 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 SLCO1B7G3V0H7 640 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 M0R082 166 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 PHF1O43189 567 aaPredicted RBP13.91□□□□□ -0.18
GPC1-206ENST00000455111 SEC14L2O76054 403 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 VAMP5O95183 116 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 WNT11O96014 354 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 FAM157CP0CG43 387 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 NCF2P19878 526 aaPredicted RBP13.91□□□□□ -0.18
GPC1-206ENST00000455111 CBLP22681 906 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 LARS2Q15031 903 aaKnown RBP13.91□□□□□ -0.18
GPC1-206ENST00000455111 ADRM1Q16186 407 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 BEND6Q5SZJ8 279 aaPredicted RBP13.91□□□□□ -0.18
GPC1-206ENST00000455111 PODNL1Q6PEZ8 512 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 MIER2Q8N344 545 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 NFKBIDQ8NI38 313 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 ZNF417Q8TAU3 575 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 FOXN4Q96NZ1 517 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 ZNF587Q96SQ5 575 aaPredicted RBP13.91□□□□□ -0.18
GPC1-206ENST00000455111 KATNB1Q9BVA0 655 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 REPIN1Q9BWE0 567 aaKnown RBP13.91□□□□□ -0.18
GPC1-206ENST00000455111 PLK3Q9H4B4 646 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 GPR35Q9HC97 309 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 OBP2BQ9NPH6 170 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 TMEM160Q9NX00 188 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 ZNF224Q9NZL3 707 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 IFT52Q9Y366 437 aa13.91□□□□□ -0.18
GPC1-206ENST00000455111 A0A096LPI6 279 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 LRRN3E7EW58 273 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 AHSA1O95433 338 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 USF1P22415 310 aaPredicted RBP13.9□□□□□ -0.18
GPC1-206ENST00000455111 GRPRP30550 384 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 NR4A2P43354 598 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 COPZ1P61923 177 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 LSM11P83369 360 aaKnown RBP eCLIP13.9□□□□□ -0.18
GPC1-206ENST00000455111 CHRNB3Q05901 458 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 EFNB3Q15768 340 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 KRTAP24-1Q3LI83 254 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 C1QTNF12Q5T7M4 302 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 VHLLQ6RSH7 139 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 LSMEM1Q8N8F7 131 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 BBS10Q8TAM1 723 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 SLC35B4Q969S0 331 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 MSI2Q96DH6 328 aaKnown RBP13.9□□□□□ -0.18
GPC1-206ENST00000455111 SLC41A3Q96GZ6 507 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 OR2M2Q96R28 347 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 RMND5AQ9H871 391 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 KLHL14Q9P2G3 628 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 PRDM4Q9UKN5 801 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 GMEB1Q9Y692 573 aa13.9□□□□□ -0.18
GPC1-206ENST00000455111 BGLAPP02818 100 aa13.89□□□□□ -0.19
GPC1-206ENST00000455111 OR4A8P0C604 315 aa13.89□□□□□ -0.19
GPC1-206ENST00000455111 PRKAR1BP31321 381 aa13.89□□□□□ -0.19
GPC1-206ENST00000455111 IL2RGP31785 369 aa13.89□□□□□ -0.19
GPC1-206ENST00000455111 THBS4P35443 961 aa13.89□□□□□ -0.19
GPC1-206ENST00000455111 SERPINF1P36955 418 aa13.89□□□□□ -0.19
GPC1-206ENST00000455111 IDH3AP50213 366 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms