RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 P04436 131 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 TACSTD2P09758 323 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 SBK2P0C263 348 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 GTF2E2P29084 291 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 SRD5A2P31213 254 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 ATP6V1E1P36543 226 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 DLSTP36957 453 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 SOX3P41225 446 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 RANBP1P43487 201 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 MAP2K4P45985 399 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 RPL27P61353 136 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 SLC35A1P78382 337 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 LSM11P83369 360 aaKnown RBP eCLIP6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 POU4F3Q15319 338 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 MOGQ16653 247 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 PLBD1Q6P4A8 553 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 DTX1Q86Y01 620 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 C10orf53Q8N6V4 93 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 ZNF454Q8N9F8 522 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 FAM98AQ8NCA5 519 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 ASB17Q8WXJ9 295 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 TAAR8Q969N4 342 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 CNN2Q99439 309 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 ALG12Q9BV10 488 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 PTDSS2Q9BVG9 487 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 PARD6AQ9NPB6 346 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 CHST11Q9NPF2 352 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 SSR3Q9UNL2 185 aa6.19□□□□□ -1.42
ECHDC1-210ENST00000454859 TRAV27A0A087WT01 109 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 TRDV1A0A1B0GX56 115 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 TMEM72A0PK05 275 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 KPNA4O00629 521 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 XKRYO14609 159 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 SULT1C4O75897 302 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 CLPXO76031 633 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 TNFSF15O95150 251 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 HLA-DPB1P04440 258 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 LCKP06239 509 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 FTH1P19P0C7X4 201 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 LIMS3P0CW19 117 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 LIMS4P0CW20 117 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 F8A1P23610 371 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 SOX6P35712 828 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 TGM4P49221 684 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 CTXN1P60606 82 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 RPL18Q07020 188 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 MED22Q15528 200 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 NDUFAF6Q330K2 333 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 TEX30Q5JUR7 227 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 ACER2Q5QJU3 275 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 TIGD3Q6B0B8 471 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 FAM199XQ6PEV8 388 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 ZNF322Q6U7Q0 402 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 PLEKHG7Q6ZR37 379 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 RHOUQ7L0Q8 258 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 SLC16A9Q7RTY1 509 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 ZBTB46Q86UZ6 589 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 ATCAYQ86WG3 371 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 MS4A15Q8N5U1 240 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 TEX19Q8NA77 164 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 GATSQ8NAP1 163 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 PRSS33Q8NF86 280 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 OR10G3Q8NGC4 313 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 KISS1RQ969F8 398 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 C8orf44Q96CB5 159 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 INTS12Q96CB8 462 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 PIGQQ9BRB3 760 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 KATNB1Q9BVA0 655 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 NXF2Q9GZY0 626 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 KCNN2Q9H2S1 579 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 CDCP1Q9H5V8 836 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 ZNF160Q9HCG1 818 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 TRIM36Q9NQ86 728 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 RASD1Q9Y272 281 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 RPH3AQ9Y2J0 694 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 IER3IP1Q9Y5U9 82 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 PTPRBP23467 1997 aa6.18□□□□□ -1.42
ECHDC1-210ENST00000454859 A0A075B6Q4 140 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 DAPL1A0PJW8 107 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 LIPT2A6NK58 231 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 MCIDASD6RGH6 385 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 GPRIN2O60269 458 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 IL1AP01583 271 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 HRGP04196 525 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 LIPCP11150 499 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 LIFP15018 202 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 HIST1H1CP16403 213 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 CNR1P21554 472 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 LIPAP38571 399 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 CYB561P49447 251 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 CSNK2A1P68400 391 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 EGR3Q06889 387 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 PUDPQ08623 228 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 KRR1Q13601 381 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 CRMP1Q14194 572 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 RTP5Q14D33 572 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 TOMM34Q15785 309 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 STK11Q15831 433 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 HYAL4Q2M3T9 481 aa6.17□□□□□ -1.42
ECHDC1-210ENST00000454859 EEF1A1P5Q5VTE0 462 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms