RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 SH3BGRP55822 239 aaPredicted RBP7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 ROR2Q01974 943 aaKnown RBP7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 EGR4Q05215 589 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 SQLEQ14534 574 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 TRIP10Q15642 601 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 LIN52Q52LA3 116 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 RPS26P11Q5JNZ5 115 aaPredicted RBP7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 SERPINA11Q86U17 422 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 PEX5LQ8IYB4 626 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 CDK20Q8IZL9 346 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 KDM8Q8N371 416 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 CLIP4Q8N3C7 705 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 FAM169BQ8N8A8 192 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 OR4F15Q8NGB8 312 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 AENQ8WTP8 325 aaKnown RBP7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 ZNF837Q96EG3 531 aaPredicted RBP7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 SNX18Q96RF0 628 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 DOK1Q99704 481 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 RAB1BQ9H0U4 201 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 ZNF442Q9H7R0 627 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 B3GAT1Q9P2W7 334 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 P2RX2Q9UBL9 471 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 RASD1Q9Y272 281 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 GPR45Q9Y5Y3 372 aa7.64□□□□□ -1.19
DEPDC1B-202ENST00000453022 IGHV2OR16-5A0A0B4J2B6 119 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 OR6C65A6NJZ3 312 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 RPL36A-HNRNPH2H7BZ11 118 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 FZD7O75084 574 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 SEC14L2O76054 403 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 CBR1P16152 277 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 ITGA2P17301 1181 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 NPR2P20594 1047 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 PAX7P23759 505 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 APEX1P27695 318 aaKnown RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 CHN2P52757 468 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 CLDN17P56750 224 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 ARF1P84077 181 aaKnown RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 RIN1Q13671 783 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 MPP2Q14168 576 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 MSMPQ1L6U9 139 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 GTDC1Q4AE62 458 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 RFLNBQ8N5W9 214 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 ZNF540Q8NDQ6 660 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 MFSD8Q8NHS3 518 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 STK35Q8TDR2 534 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 SLC38A5Q8WUX1 472 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 VPS33AQ96AX1 596 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 TMEM109Q9BVC6 243 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 RSPO3Q9BXY4 272 aaPredicted RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 RCE1Q9Y256 329 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 A0A096LPI6 279 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 LYNX1G3V0Z9 82 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 RFXANKO14593 260 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 TCF21O43680 179 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 SNUPNO95149 360 aaKnown RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 AHSA1O95433 338 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 KRT75O95678 551 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 LYNX1P0DP58 116 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 NCF2P19878 526 aaPredicted RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 RPS5P46782 204 aaKnown RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 CRISP3P54108 245 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 CDH15P55291 814 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 DSTNP60981 165 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 COPZ1P61923 177 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 HOXC5Q00444 222 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 LRRC74AQ0VAA2 488 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 BST1Q10588 318 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 ADRM1Q16186 407 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 PHYHD1Q5SRE7 291 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 LIPNQ5VXI9 398 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 ATG16L1Q676U5 607 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 SPATA21Q7Z572 469 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 MDP1Q86V88 176 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 MEX3DQ86XN8 651 aaKnown RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 TMEM123Q8N131 208 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 ZNF786Q8N393 782 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 LINC01356Q8N9X3 169 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 ANKK1Q8NFD2 765 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 NEU4Q8WWR8 484 aaPredicted RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 HPS1Q92902 700 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 SLC25A36Q96CQ1 311 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 KTI12Q96EK9 354 aaPredicted RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 TMEM19Q96HH6 336 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 SPATA9Q9BWV2 254 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 WDR55Q9H6Y2 383 aaPredicted RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 NOX3Q9HBY0 568 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 GPR35Q9HC97 309 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 MOV10Q9HCE1 1003 aaKnown RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 SSU72Q9NP77 194 aaKnown RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 TMEFF2Q9UIK5 374 aaPredicted RBP7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 PRDM4Q9UKN5 801 aa7.63□□□□□ -1.19
DEPDC1B-202ENST00000453022 SH3PXD2BA1X283 911 aa7.62□□□□□ -1.19
DEPDC1B-202ENST00000453022 TM9SF1O15321 606 aa7.62□□□□□ -1.19
DEPDC1B-202ENST00000453022 TRAF3IP2O43734 574 aaPredicted RBP7.62□□□□□ -1.19
DEPDC1B-202ENST00000453022 ADRA2AP08913 450 aa7.62□□□□□ -1.19
DEPDC1B-202ENST00000453022 ZNF43P17038 809 aa7.62□□□□□ -1.19
DEPDC1B-202ENST00000453022 EPHA3P29320 983 aa7.62□□□□□ -1.19
DEPDC1B-202ENST00000453022 CRATP43155 626 aa7.62□□□□□ -1.19
DEPDC1B-202ENST00000453022 GUCA2AQ02747 115 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms