RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 GABRPO00591 440 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 IGF2P01344 180 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 HLA-DPB1P04440 258 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 HNRNPCP07910 306 aaKnown RBP eCLIP9.74□□□□□ -0.853e-11■□□□□ 10.3
PKP4-206ENST00000452162 GALP22466 123 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 MST1P26927 711 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 LCN1P31025 176 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 DCAF7P61962 342 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 RPS7P62081 194 aaKnown RBP9.74□□□□□ -0.85
PKP4-206ENST00000452162 GPR50Q13585 617 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 CBLN3Q6UW01 205 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 OR10H4Q8NGA5 316 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 OR52E2Q8NGJ4 325 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 PHOSPHO1Q8TCT1 267 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 KIAA1143Q96AT1 154 aaPredicted RBP9.74□□□□□ -0.85
PKP4-206ENST00000452162 ZNF524Q96C55 264 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 CCDC32Q9BV29 185 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 VN1R1Q9GZP7 353 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 MIXL1Q9H2W2 232 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 KLHL21Q9UJP4 597 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 ZNF337Q9Y3M9 751 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 ZFYVE26Q68DK2 2539 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 C2orf92A0A1B0GVN3 265 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 HTR3EA5X5Y0 456 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 TO15178 435 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 RGS5O15539 181 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 ZNF264O43296 627 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 RNF13O43567 381 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 ICOSLGO75144 302 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 MRPL3P09001 348 aaKnown RBP9.74□□□□□ -0.85
PKP4-206ENST00000452162 PNMTP11086 282 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 HPGDP15428 266 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 HIST1H1CP16403 213 aaKnown RBP9.74□□□□□ -0.85
PKP4-206ENST00000452162 ZNF85Q03923 595 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 NSDHLQ15738 373 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 AGAP7PQ5VUJ5 663 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 DESI1Q6ICB0 168 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 DPY19L2P2Q6ZN68 376 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 TMEM91Q6ZNR0 172 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 COX15Q7KZN9 410 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 ART5Q96L15 291 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 GAL3ST4Q96RP7 486 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 GPX7Q96SL4 187 aaPredicted RBP9.74□□□□□ -0.85
PKP4-206ENST00000452162 ADOQ96SZ5 270 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 KLHDC3Q9BQ90 382 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 NEURL2Q9BR09 285 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 TMEM43Q9BTV4 400 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 HDHD5Q9BXW7 423 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 MRTO4Q9UKD2 239 aaKnown RBP9.74□□□□□ -0.85
PKP4-206ENST00000452162 POLHQ9Y253 713 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 IER3IP1Q9Y5U9 82 aa9.74□□□□□ -0.85
PKP4-206ENST00000452162 SHISA3A0PJX4 238 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 ELOA3DA6NLF2 546 aaPredicted RBP9.73□□□□□ -0.85
PKP4-206ENST00000452162 C21orf140B9A014 251 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 TSPAN2O60636 221 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 GYPBP06028 91 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 SLC16A1P53985 500 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 CXADRP78310 365 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 POU4F2Q12837 409 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 GGTLC2Q14390 218 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 COL28A1Q2UY09 1125 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 ELOA3BQ3SY89 546 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 PRR22Q8IZ63 422 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 POC5Q8NA72 575 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 SDR9C7Q8NEX9 313 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 ELOA3Q8NG57 546 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 OR1N1Q8NGS0 311 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 OR4K13Q8NH42 304 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 LIPHQ8WWY8 451 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 SMPDL3BQ92485 455 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 DAZLQ92904 295 aaKnown RBP9.73□□□□□ -0.85
PKP4-206ENST00000452162 DDOQ99489 341 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 RTN4RQ9BZR6 473 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 WWTR1Q9GZV5 400 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 LAT2Q9GZY6 243 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 ABCB9Q9NP78 766 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 CTSFQ9UBX1 484 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 FARSAQ9Y285 508 aaKnown RBP9.73□□□□□ -0.85
PKP4-206ENST00000452162 ADAM18Q9Y3Q7 739 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 C9J4A7 227 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 BOLA2-SMG1P6H3BVE0 249 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 GTPBP1O00178 669 aaKnown RBP9.73□□□□□ -0.85
PKP4-206ENST00000452162 ARPC3O15145 178 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 NKX2-8O15522 239 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 ONECUT2O95948 504 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 PTTG1O95997 202 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 MT-ND5P03915 603 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 IMPDH2P12268 514 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 CCR4P51679 360 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 TMPRSS3P57727 454 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 RPS15P62841 145 aaKnown RBP9.73□□□□□ -0.85
PKP4-206ENST00000452162 ACTC1P68032 377 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 ACTA1P68133 377 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 INSL4Q14641 139 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 ZNF79Q15937 498 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 ZNF74Q16587 644 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 GXYLT1Q4G148 440 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 FAAH2Q6GMR7 532 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 MRPL14Q6P1L8 145 aaKnown RBP9.73□□□□□ -0.85
PKP4-206ENST00000452162 PRSS58Q8IYP2 241 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms