RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 ITGA2P17301 1181 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 KLK2P20151 261 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 GRPRP30550 384 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 UGT2B10P36537 528 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 RBM34P42696 430 aaKnown RBP7.88□□□□□ -1.15
COL8A1-203ENST00000452013 PMS2P3Q13401 168 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 PIN1Q13526 163 aaPredicted RBP7.88□□□□□ -1.15
COL8A1-203ENST00000452013 C1DQ13901 141 aaKnown RBP7.88□□□□□ -1.15
COL8A1-203ENST00000452013 DAZAP2Q15038 168 aaPredicted RBP7.88□□□□□ -1.15
COL8A1-203ENST00000452013 TFAP2EQ6VUC0 442 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 AAED1Q7RTV5 226 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 VTCN1Q7Z7D3 282 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 GPAT4Q86UL3 456 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 P3H2Q8IVL5 708 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 AQP12AQ8IXF9 295 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 UBE2J2Q8N2K1 259 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 SCAIQ8N9R8 606 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 STEAP2Q8NFT2 490 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 OR9K2Q8NGE7 335 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 LINC01560Q8TB33 94 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 TMEM45BQ96B21 275 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 APH1AQ96BI3 265 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 CCDC124Q96CT7 223 aaKnown RBP7.88□□□□□ -1.15
COL8A1-203ENST00000452013 PYURFQ96I23 114 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 HSH2DQ96JZ2 352 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 NSMCE2Q96MF7 247 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 PTDSS2Q9BVG9 487 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 FNDC11Q9BVV2 318 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 MRPS26Q9BYN8 205 aaKnown RBP7.88□□□□□ -1.15
COL8A1-203ENST00000452013 AMBRA1Q9C0C7 1298 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 ZNF696Q9H7X3 374 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 ZNF226Q9NYT6 803 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 SNX13Q9Y5W8 968 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 FLVCR1Q9Y5Y0 555 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 MYO18BQ8IUG5 2567 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 NINQ8N4C6 2090 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 PRRC2CQ9Y520 2896 aaKnown RBP7.88□□□□□ -1.15
COL8A1-203ENST00000452013 RELNP78509 3460 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 SH3D21A4FU49 640 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 OR6C65A6NJZ3 312 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 M0R082 166 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 ACOT8O14734 319 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 RAMP1O60894 148 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 FZD7O75084 574 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 PDE5AO76074 875 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 LYPD3O95274 346 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 CH25HO95992 272 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 ADAP00813 363 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 IGF2P01344 180 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 BGLAPP02818 100 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 THY1P04216 161 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 UMPSP11172 480 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 PSMB1P20618 241 aaKnown RBP7.87□□□□□ -1.15
COL8A1-203ENST00000452013 CBLP22681 906 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 PEX2P28328 305 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 MSX2P35548 267 aaPredicted RBP7.87□□□□□ -1.15
COL8A1-203ENST00000452013 RPL5P46777 297 aaKnown RBP7.87□□□□□ -1.15
COL8A1-203ENST00000452013 IL1RL1Q01638 556 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 TLE4Q04727 773 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 LTBQ06643 244 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 ITGADQ13349 1161 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 SNTB1Q13884 538 aaKnown RBP7.87□□□□□ -1.15
COL8A1-203ENST00000452013 TRAM2Q15035 370 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 POU4F3Q15319 338 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 FXNQ16595 210 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 SFRP5Q5T4F7 317 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 FBXW9Q5XUX1 488 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 UGT2A3Q6UWM9 527 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 CASP12Q6UXS9 341 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 STAC2Q6ZMT1 411 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 Q6ZT83 130 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 CREB3L2Q70SY1 520 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 RRM2BQ7LG56 351 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 SSX8Q7RTT4 187 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 CDK20Q8IZL9 346 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 RNF113BQ8IZP6 322 aaKnown RBP7.87□□□□□ -1.15
COL8A1-203ENST00000452013 ZNF295-AS1Q8N0V1 137 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 ZIC4Q8N9L1 334 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 FAM156AQ8NDB6 213 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 ADPRHL1Q8NDY3 354 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 ZNF417Q8TAU3 575 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 TMEM239Q8WW34 195 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 DGCR14Q96DF8 476 aaKnown RBP7.87□□□□□ -1.15
COL8A1-203ENST00000452013 PRRC1Q96M27 445 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 ZNF587Q96SQ5 575 aaPredicted RBP7.87□□□□□ -1.15
COL8A1-203ENST00000452013 PRSS27Q9BQR3 290 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 MED18Q9BUE0 208 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 YIPF3Q9GZM5 350 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 NANSQ9NR45 359 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 ARMC1Q9NVT9 282 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 MRPL39Q9NYK5 338 aaKnown RBP7.87□□□□□ -1.15
COL8A1-203ENST00000452013 CRIM1Q9NZV1 1036 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 UPB1Q9UBR1 384 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 A4GNTQ9UNA3 340 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 MED31Q9Y3C7 131 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 ENPP4Q9Y6X5 453 aa7.87□□□□□ -1.15
COL8A1-203ENST00000452013 TCRBV3S1A0A5B6 114 aa7.86□□□□□ -1.15
COL8A1-203ENST00000452013 MS4A18H0YCH9 400 aa7.86□□□□□ -1.15
COL8A1-203ENST00000452013 ARPC2O15144 300 aa7.86□□□□□ -1.15
COL8A1-203ENST00000452013 AKAP8O43823 692 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms