RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 CRIM1Q9NZV1 1036 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 SEC14L4Q9UDX3 406 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 ZNF229Q9UJW7 825 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 GPR52Q9Y2T5 361 aa12.71□□□□□ -0.37
COL3A1-203ENST00000450867 TUBAL3A6NHL2 446 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 PDLIM1O00151 329 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 TRAF3IP2O43734 574 aaPredicted RBP12.7□□□□□ -0.38
COL3A1-203ENST00000450867 MRPL33O75394 65 aaKnown RBP12.7□□□□□ -0.38
COL3A1-203ENST00000450867 TSPAN19P0C672 248 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 ASAH2BP0C7U1 165 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 EPXP11678 715 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 PRF1P14222 555 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 PPP3CBP16298 524 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 MSX2P35548 267 aaPredicted RBP12.7□□□□□ -0.38
COL3A1-203ENST00000450867 UGT2B15P54855 530 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 BNIP1Q12981 228 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 TRAM2Q15035 370 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 FBXW9Q5XUX1 488 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 SLC46A3Q7Z3Q1 461 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 ZNF100Q8IYN0 542 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 PIK3C3Q8NEB9 887 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 OR5J2Q8NH18 312 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 TMEM255BQ8WV15 326 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 TMEM239Q8WW34 195 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 POP5Q969H6 163 aaKnown RBP12.7□□□□□ -0.38
COL3A1-203ENST00000450867 APH1AQ96BI3 265 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 ZNF775Q96BV0 537 aaPredicted RBP12.7□□□□□ -0.38
COL3A1-203ENST00000450867 PYURFQ96I23 114 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 DHRS1Q96LJ7 313 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 ZNF385AQ96PM9 386 aaKnown RBP12.7□□□□□ -0.38
COL3A1-203ENST00000450867 USB1Q9BQ65 265 aaKnown RBP12.7□□□□□ -0.38
COL3A1-203ENST00000450867 ASPNQ9BXN1 380 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 HDHD5Q9BXW7 423 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 NDUFAF4Q9P032 175 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 PRSS50Q9UI38 385 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 RCE1Q9Y256 329 aa12.7□□□□□ -0.38
COL3A1-203ENST00000450867 SH3D21A4FU49 640 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 OR6C65A6NJZ3 312 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 LRRN3E7EW58 273 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 MS4A18H0YCH9 400 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 J3KTA2 159 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 PLPP3O14495 311 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 ZNF432O94892 652 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 HPRP00739 348 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 RHCEP18577 417 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 PTNP21246 168 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 ATP6V1B2P21281 511 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 VLDLRP98155 873 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 ZP4Q12836 540 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 ITGADQ13349 1161 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 EXOC3L2Q2M3D2 409 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 MS4A18Q3C1V0 323 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 DNAL1Q4LDG9 190 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 SFRP5Q5T4F7 317 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 PGM2L1Q6PCE3 622 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 GPAT4Q86UL3 456 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 ASB9Q96DX5 294 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 BOD1Q96IK1 185 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 FNDC11Q9BVV2 318 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 NDRG3Q9UGV2 375 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 NOX1Q9Y5S8 564 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 AKAP6Q13023 2319 aa12.69□□□□□ -0.38
COL3A1-203ENST00000450867 CADP27708 2225 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 A0A1W2PRQ8 180 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 TCRBV5S2A0A599 114 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 ENO4A6NNW6 628 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 CYSRT1A8MQ03 144 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 ZNF43P17038 809 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 FUT4P22083 530 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 MS4A2Q01362 244 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 PUDPQ08623 228 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 SNTB1Q13884 538 aaKnown RBP12.68□□□□□ -0.38
COL3A1-203ENST00000450867 DGCR6Q14129 220 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 CASP12Q6UXS9 341 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 PIWIL3Q7Z3Z3 882 aaKnown RBP12.68□□□□□ -0.38
COL3A1-203ENST00000450867 PXKQ7Z7A4 578 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 CYP4Z1Q86W10 505 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 CXorf67Q86X51 503 aaPredicted RBP12.68□□□□□ -0.38
COL3A1-203ENST00000450867 RNF113BQ8IZP6 322 aaKnown RBP12.68□□□□□ -0.38
COL3A1-203ENST00000450867 POMGNT2Q8NAT1 580 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 STEAP2Q8NFT2 490 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 PFN4Q8NHR9 129 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 LINC01560Q8TB33 94 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 ACOT11Q8WXI4 607 aaPredicted RBP12.68□□□□□ -0.38
COL3A1-203ENST00000450867 WFIKKN1Q96NZ8 548 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 BTBD10Q9BSF8 475 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 FUZQ9BT04 418 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 NMNAT1Q9HAN9 279 aaPredicted RBP12.68□□□□□ -0.38
COL3A1-203ENST00000450867 MCCC2Q9HCC0 563 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 NANSQ9NR45 359 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 C20orf141Q9NUB4 165 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 C6orf203Q9P0P8 240 aaPredicted RBP12.68□□□□□ -0.38
COL3A1-203ENST00000450867 MED31Q9Y3C7 131 aa12.68□□□□□ -0.38
COL3A1-203ENST00000450867 ROS1P08922 2347 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 RAI1Q7Z5J4 1906 aaPredicted RBP12.67□□□□□ -0.38
COL3A1-203ENST00000450867 A0A087WUU8 490 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 A6NNC1 897 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 KPNA4O00629 521 aaPredicted RBP12.67□□□□□ -0.38
COL3A1-203ENST00000450867 ACOT8O14734 319 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 CTAG2O75638 210 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms