RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PCYT1BQ9Y5K3 369 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-204ENST00000448183 FAM227AF5H4B4 570 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 TRAPPC2LH3BP13 241 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 OR7C1O76099 320 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-204ENST00000448183 TPPPO94811 219 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 PMS2P2O95744 297 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 C1QBP02746 253 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 PVRP15151 417 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 KITLGP21583 273 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 RPS19P39019 145 aaKnown RBP7.22□□□□□ -1.25
NEDD9-204ENST00000448183 MAGEB1P43366 347 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 KIAA1024LP59773 190 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 PCBD1P61457 104 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 SNRPGP62308 76 aaKnown RBP7.22□□□□□ -1.25
NEDD9-204ENST00000448183 EEF1A1P68104 462 aaKnown RBP7.22□□□□□ -1.25
NEDD9-204ENST00000448183 SLC35A2P78381 396 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 SLC7A9P82251 487 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 MRPS34P82930 218 aaKnown RBP7.22□□□□□ -1.25
NEDD9-204ENST00000448183 FOXK2Q01167 660 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 RBMS3Q6XE24 437 aaKnown RBP7.22□□□□□ -1.25
NEDD9-204ENST00000448183 SLC35D2Q76EJ3 337 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 OR2A12Q8NGT7 310 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 LKAAEAR1Q8TD35 194 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 SCARB1Q8WTV0 552 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 MSI2Q96DH6 328 aaKnown RBP7.22□□□□□ -1.25
NEDD9-204ENST00000448183 TSSK2Q96PF2 358 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 A4GALTQ9NPC4 353 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 TCRBV5S1A1TA0A578 114 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 ANKRD34BA5PLL1 514 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 ALX3O95076 343 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 IL2RGP31785 369 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 ETV1P50549 477 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 CCR6P51684 374 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 TLE4Q04727 773 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 ZMAT1Q5H9K5 638 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 FAM57BQ71RH2 274 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 RDH10Q8IZV5 341 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 MFSD9Q8NBP5 474 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 C20orf85Q9H1P6 137 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 SMCO4Q9NRQ5 59 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 MCTS1Q9ULC4 181 aaKnown RBP7.22□□□□□ -1.25
NEDD9-204ENST00000448183 RGPD8O14715 1765 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-204ENST00000448183 AGAP14A8MT82 685 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 PAPLNO95428 1278 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 CYBAP13498 195 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 CLDN2P57739 230 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 SRPXP78539 464 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 CTBSQ01459 385 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 TNFRSF17Q02223 184 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 TGFBR3Q03167 851 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 TANGO2Q6ICL3 276 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 C5orf46Q6UWT4 87 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 MOB3CQ70IA8 216 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 KLHDC8BQ8IXV7 354 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 SLC39A11Q8N1S5 342 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 PGBD5Q8N414 524 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 PSMF1Q92530 271 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 PIGCQ92535 297 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 MARC2Q969Z3 335 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 SELENOIQ9C0D9 397 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 WDR76Q9H967 626 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 PRAMEF27A3QJZ7 478 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 SMLR1H3BR10 107 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 DDAH2O95865 285 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 F3P13726 295 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 OMGP23515 440 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 PLGLAQ15195 96 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF74Q16587 644 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 COX20Q5RI15 118 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 PRAMEF9Q5VWM5 478 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 Q6ZTK2 550 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF595Q8IYB9 648 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 MMP21Q8N119 569 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 FRMD1Q8N878 549 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 CPT1CQ8TCG5 803 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 CPNE4Q96A23 557 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-204ENST00000448183 NMNAT3Q96T66 252 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 SLC46A2Q9BY10 475 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 MS4A8Q9BY19 250 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 OR52A5Q9H2C5 316 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 ASIC5Q9NY37 505 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 CLEC2DQ9UHP7 191 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 MUTYHQ9UIF7 546 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 PCDHGA1Q9Y5H4 931 aa7.22□□□□□ -1.25
NEDD9-204ENST00000448183 SCN11AQ9UI33 1791 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 TMEM129A0AVI4 362 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 H0YGG7 62 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 SCGB1D1O95968 90 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 HLA-FP30511 346 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 ASAH1Q13510 395 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 SFRP5Q5T4F7 317 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 LDLRAD1Q5T700 205 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 CST9LP1Q5W188 147 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 OR5L1Q8NGL2 311 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 UBE2FQ969M7 185 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 INSM2Q96T92 566 aaPredicted RBP7.21□□□□□ -1.25
NEDD9-204ENST00000448183 AMBRA1Q9C0C7 1298 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 ENKD1Q9H0I2 346 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 CREBZFQ9NS37 354 aa7.21□□□□□ -1.25
NEDD9-204ENST00000448183 MRPS28Q9Y2Q9 187 aaKnown RBP7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms