RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 CLEC4AQ9UMR7 237 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 MAP1AP78559 2803 aaPredicted RBP12.57□□□□□ -0.4
SREBF1-207ENST00000447641 CHP2O43745 196 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 RAMP1O60894 148 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 TIPRLO75663 272 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 CST1P01037 141 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 IFNW1P05000 195 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 OR1E2P47887 323 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 RASGEF1BQ0VAM2 473 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 OGFRL1Q5TC84 451 aaPredicted RBP12.56□□□□□ -0.4
SREBF1-207ENST00000447641 ZNF474Q6S9Z5 364 aaPredicted RBP12.56□□□□□ -0.4
SREBF1-207ENST00000447641 WDR88Q6ZMY6 472 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 VTCN1Q7Z7D3 282 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 HIPK1Q86Z02 1210 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 ZDHHC21Q8IVQ6 265 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 CCDC103Q8IW40 242 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 TUSC5Q8IXB3 177 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 DMRTC2Q8IXT2 367 aaPredicted RBP12.56□□□□□ -0.4
SREBF1-207ENST00000447641 CNEP1R1Q8N9A8 125 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 TAAR8Q969N4 342 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 SLCO4A1Q96BD0 722 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 ZHX1-C8orf76Q96EF9 292 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 DNAJA3Q96EY1 480 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 HSH2DQ96JZ2 352 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 PRSS27Q9BQR3 290 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 TACO1Q9BSH4 297 aaKnown RBP12.56□□□□□ -0.4
SREBF1-207ENST00000447641 KLHL9Q9P2J3 617 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 RIMS3Q9UJD0 308 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 EMC9Q9Y3B6 208 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 V9GYQ6 96 aa12.56□□□□□ -0.4
SREBF1-207ENST00000447641 HRNRQ86YZ3 2850 aaPredicted RBP12.55□□□□□ -0.4
SREBF1-207ENST00000447641 TRAV36DV7A0A075B6V5 113 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 AQP7P3A6NL99 342 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 CPSF4LA6NMK7 179 aaKnown RBP12.55□□□□□ -0.4
SREBF1-207ENST00000447641 EEF1E1-BLOC1S5C9J1V9 151 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 EEF1E1O43324 174 aaKnown RBP12.55□□□□□ -0.4
SREBF1-207ENST00000447641 E2F6O75461 281 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 PLGP00747 810 aaPredicted RBP12.55□□□□□ -0.4
SREBF1-207ENST00000447641 THRBP10828 461 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 MAGEA2P43356 314 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 CTBP2P56545 445 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 SIRPAP78324 504 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 SLC17A1Q14916 467 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 OR7A5Q15622 319 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 PPP4R4Q6NUP7 873 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 NUFIP2Q7Z417 695 aaKnown RBP12.55□□□□□ -0.4
SREBF1-207ENST00000447641 TSEN54Q7Z6J9 526 aaKnown RBP12.55□□□□□ -0.4
SREBF1-207ENST00000447641 CDH24Q86UP0 819 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 ZDHHC13Q8IUH4 622 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 ZNF610Q8N9Z0 462 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 PIGXQ8TBF5 258 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 LRTOMTQ8WZ04 291 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 NRBF2Q96F24 287 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 MPP4Q96JB8 637 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 ZNF184Q99676 751 aaPredicted RBP12.55□□□□□ -0.4
SREBF1-207ENST00000447641 PKP2Q99959 881 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 NAA11Q9BSU3 229 aaPredicted RBP12.55□□□□□ -0.4
SREBF1-207ENST00000447641 AMBRA1Q9C0C7 1298 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 OPN3Q9H1Y3 402 aaPredicted RBP12.55□□□□□ -0.4
SREBF1-207ENST00000447641 REEP1Q9H902 201 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 SELENONQ9NZV5 590 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 SLC7A7Q9UM01 511 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 ORC6Q9Y5N6 252 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 NAV3Q8IVL0 2385 aa12.55□□□□□ -0.4
SREBF1-207ENST00000447641 OR2T1O43869 369 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 AKR7A3O95154 331 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 OR5F1O95221 314 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 AHSA1O95433 338 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 SSTR2P30874 369 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 NTF4P34130 210 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 RPS5P46782 204 aaKnown RBP12.54□□□□□ -0.4
SREBF1-207ENST00000447641 LTBQ06643 244 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 PIN1Q13526 163 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-207ENST00000447641 TMEM201Q5SNT2 666 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 FAM69AQ5T7M9 428 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 ZBTB49Q6ZSB9 765 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 LUZP2Q86TE4 346 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 P3H2Q8IVL5 708 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 TMEM99Q8N816 258 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 DNAJC9Q8WXX5 260 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 C14orf79Q96F83 325 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 LRRC46Q96FV0 321 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 SLC41A3Q96GZ6 507 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 C7orf34Q96L11 122 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 ZNF300Q96RE9 604 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-207ENST00000447641 SF3B5Q9BWJ5 86 aaKnown RBP12.54□□□□□ -0.4
SREBF1-207ENST00000447641 RBM24Q9BX46 236 aaKnown RBP12.54□□□□□ -0.4
SREBF1-207ENST00000447641 SLC19A3Q9BZV2 496 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 GALNT8Q9NY28 637 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 ELOVL5Q9NYP7 299 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 A4GNTQ9UNA3 340 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 PROCRQ9UNN8 238 aa12.54□□□□□ -0.4
SREBF1-207ENST00000447641 LOC102725191A0A1B0GVB3 256 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 GPR171O14626 319 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 FFAR1O14842 300 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 SMNDC1O75940 238 aaKnown RBP eCLIP12.53□□□□□ -0.44e-6■■■□□ 17.6
SREBF1-207ENST00000447641 PRSS23O95084 383 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 BGLAPP02818 100 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 SEMG1P04279 462 aa12.53□□□□□ -0.4
SREBF1-207ENST00000447641 ACADSP16219 412 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms