RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SOX14O95416 240 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 NTN1O95631 604 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 CELA2AP08217 269 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 IFI30P13284 250 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 PCMT1P22061 227 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 CD82P27701 267 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 GGT2P36268 569 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 OMPP47874 163 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 DEFA1P59665 94 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 DEFA3P59666 94 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 ALDH6A1Q02252 535 aaKnown RBP7.37□□□□□ -1.23
CCDC39-201ENST00000442201 PTGES3Q15185 160 aaKnown RBP7.37□□□□□ -1.23
CCDC39-201ENST00000442201 Q6ZPB1 254 aaPredicted RBP7.37□□□□□ -1.23
CCDC39-201ENST00000442201 MAMDC2Q7Z304 686 aaPredicted RBP7.37□□□□□ -1.23
CCDC39-201ENST00000442201 STX12Q86Y82 276 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 MARCH9Q86YJ5 346 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 MISPQ8IVT2 679 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 IL22RA1Q8N6P7 574 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 ADAMTS14Q8WXS8 1223 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 FAM46AQ96IP4 442 aaKnown RBP7.37□□□□□ -1.23
CCDC39-201ENST00000442201 RASL10BQ96S79 203 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 WNT5BQ9H1J7 359 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 MMP27Q9H306 513 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 CNIH4Q9P003 139 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 MED31Q9Y3C7 131 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 E9PQ18 207 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 TRIM3O75382 744 aaPredicted RBP7.36□□□□□ -1.23
CCDC39-201ENST00000442201 HPP00738 406 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 FBXO45P0C2W1 286 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 FPR3P25089 353 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 ITPKBP27987 946 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 RBM34P42696 430 aaKnown RBP7.36□□□□□ -1.23
CCDC39-201ENST00000442201 IDH2P48735 452 aaKnown RBP7.36□□□□□ -1.23
CCDC39-201ENST00000442201 GP2P55259 537 aaKnown RBP7.36□□□□□ -1.23
CCDC39-201ENST00000442201 ZNF117Q03924 483 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 WBP2NLQ6ICG8 309 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 WDR88Q6ZMY6 472 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 ADCK1Q86TW2 530 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 RAB43Q86YS6 212 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 CDK20Q8IZL9 346 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 NDNFQ8TB73 568 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 YIPF6Q96EC8 236 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 WBP1Q96G27 269 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 NODALQ96S42 347 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 GPA33Q99795 319 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 RTN4RQ9BZR6 473 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 RANGRFQ9HD47 186 aaPredicted RBP7.36□□□□□ -1.23
CCDC39-201ENST00000442201 P4HTMQ9NXG6 502 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 MALT1Q9UDY8 824 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 FBXL4Q9UKA2 621 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 EDARQ9UNE0 448 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 GVINP1Q7Z2Y8 2422 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 AHCTF1Q8WYP5 2266 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 ZNF292O60281 2723 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 LOC101059948A0A1B0GTJ6 334 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 TERTO14746 1132 aaKnown RBP7.36□□□□□ -1.23
CCDC39-201ENST00000442201 GNB5O14775 395 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 ITGA10O75578 1167 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 NUDT14O95848 222 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 APOA1P02647 267 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 H2AFB1P0C5Y9 115 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 H2AFB2P0C5Z0 115 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 PTNP21246 168 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 ELK4P28324 431 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 STARP49675 285 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 CDC42P60953 191 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 ZNF169Q14929 603 aaPredicted RBP7.36□□□□□ -1.23
CCDC39-201ENST00000442201 MEP1AQ16819 746 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 C6orf141Q5SZD1 244 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 OPN5Q6U736 354 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 C5orf46Q6UWT4 87 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 MRGPREQ86SM8 312 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 RPS19BP1Q86WX3 136 aaKnown RBP7.36□□□□□ -1.23
CCDC39-201ENST00000442201 MEX3DQ86XN8 651 aaKnown RBP7.36□□□□□ -1.23
CCDC39-201ENST00000442201 ZNF563Q8TA94 476 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 HGDQ93099 445 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 SPACA9Q96E40 222 aaPredicted RBP7.36□□□□□ -1.23
CCDC39-201ENST00000442201 SGTBQ96EQ0 304 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 IMPAD1Q9NX62 359 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 LAMP5Q9UJQ1 280 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 KCNK7Q9Y2U2 307 aa7.36□□□□□ -1.23
CCDC39-201ENST00000442201 YARS2Q9Y2Z4 477 aaKnown RBP7.36□□□□□ -1.23
CCDC39-201ENST00000442201 ZAR1LA6NP61 321 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 PIP5K1CO60331 668 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 EIF1BO60739 113 aaKnown RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 CDK1P06493 297 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 FABP1P07148 127 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 HTR1AP08908 422 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 HSMCR30P0CW71 290 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 ADORA3P0DMS8 318 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 PGCP20142 388 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 CRHBPP24387 322 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 EIF1P41567 113 aaKnown RBP7.35□□□□□ -1.23
CCDC39-201ENST00000442201 GPR4P46093 362 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 RAB13P51153 203 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 C17orf67Q0P5P2 114 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 LRFN4Q6PJG9 635 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 RASSF6Q6ZTQ3 369 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 PHC2Q8IXK0 858 aa7.35□□□□□ -1.23
CCDC39-201ENST00000442201 OR5T2Q8NGG2 359 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms