RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 SPRYD4Q8WW59 207 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 LHX4Q969G2 390 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZG16BQ96DA0 208 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 NKX3-1Q99801 234 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 P2RY13Q9BPV8 354 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC38A1Q9H2H9 487 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 RHOJQ9H4E5 214 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 GPR83Q9NYM4 423 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 TAS2R9Q9NYW1 312 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 FBXL3Q9UKT7 428 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 IKZF3Q9UKT9 509 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 KPTNQ9Y664 436 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLCO1B1Q9Y6L6 691 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 WDR81Q562E7 1941 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 IBTKQ9P2D0 1353 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 A0A1W2PQ72 361 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 DNAJC9-AS1A6NH13 148 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SERPINE3A8MV23 424 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 TCP10L2B9ZVM9 353 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 MKRN2OSH3BPM6 223 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 CLDN5O00501 218 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC31A2O15432 143 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 MED6O75586 246 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 B3GAT3O94766 335 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 NDUFB10O96000 172 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 TNNC2P02585 160 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 EDN1P05305 212 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 GUSBP08236 651 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC35G4P0C7Q5 338 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC35E2BP0CK96 405 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC35E2P0CK97 266 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 GFAPP14136 432 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 UQCRBP14927 111 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 CD38P28907 300 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 HCAR3P49019 387 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 MRPL19P49406 292 aaKnown RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 CDKL1Q00532 357 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF45Q02386 682 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 AQP6Q13520 282 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 TFDP1Q14186 410 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SMCO1Q147U7 214 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZBTB6Q15916 424 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 PSG3Q16557 428 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 CHRFAM7AQ494W8 412 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SBK1Q52WX2 424 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 C9orf57Q5W0N0 161 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 NPSR1Q6W5P4 371 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 SNX20Q7Z614 316 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF546Q86UE3 836 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 LACC1Q8IV20 430 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZFP82Q8N141 532 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 CYP4Z2PQ8N1L4 340 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 CENPSQ8N2Z9 138 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 MARVELD2Q8N4S9 558 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 METTL27Q8N6F8 245 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 ACBD4Q8NC06 268 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 CHDHQ8NE62 594 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 NEK7Q8TDX7 302 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 DYRK2Q92630 601 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 AKR1E2Q96JD6 320 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 PRRT1Q99946 306 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 OMDQ99983 421 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 FEM1AQ9BSK4 669 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 METTL9Q9H1A3 318 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 ALG9Q9H6U8 611 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR2S2Q9NQN1 319 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 NLGN3Q9NZ94 848 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 STOX2Q9P2F5 926 aaPredicted RBP3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 RICTORQ6R327 1708 aa3.51□□□□□ -1.85
CDC42BPA-207ENST00000441725 LRP6O75581 1613 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 TRAPPC8Q9Y2L5 1435 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 A0A1W2PR80 420 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR5H15A6NDH6 313 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 MSGN1A6NI15 193 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 E9PQ18 207 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 CFLARO15519 480 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 CTNSO60931 367 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 DEXIO95424 95 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 PAK4O96013 591 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 ERCC1P07992 297 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC2A1P11166 492 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 PPP2R1BP30154 601 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 KPNA2P52292 529 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 ARF6P62330 175 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZP4Q12836 540 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 RIGQ13278 110 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC17A1Q14916 467 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 MICBQ29980 383 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 RFTN2Q52LD8 501 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 MARC1Q5VT66 337 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 C19orf35Q6ZS72 473 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 STOX1Q6ZVD7 989 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 USP43Q70EL4 1123 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 ARCQ7LC44 396 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 TRPT1Q86TN4 253 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 LHFPL3Q86UP9 236 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 PARGQ86W56 976 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 SYT14Q8NB59 555 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 SDR9C7Q8NEX9 313 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 DMBX1Q8NFW5 382 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms