RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 MEP1BQ16820 701 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 GLYR1Q49A26 553 aaPredicted RBP6.22□□□□□ -1.41
USP46-201ENST00000441222 FRMPD2BQ6IN97 320 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.22□□□□□ -1.41
USP46-201ENST00000441222 HMGN2P46Q86SG4 172 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 KDM8Q8N371 416 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 CPXM2Q8N436 756 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 KCNRGQ8N5I3 272 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 NHLRC2Q8NBF2 726 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 KCNJ15Q99712 375 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 VAPAQ9P0L0 249 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 CD207Q9UJ71 328 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 FBXL4Q9UKA2 621 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 PTGDR2Q9Y5Y4 395 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 GABRPO00591 440 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 BET1O15155 118 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 PRAMEF4O60810 478 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 FBXO24O75426 580 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 NXPH2O95156 264 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 FBXO45P0C2W1 286 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 MGST1P10620 155 aaKnown RBP6.22□□□□□ -1.41
USP46-201ENST00000441222 GABRA4P48169 554 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 SSR4P51571 173 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 MAMDC4Q6UXC1 1216 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 COX15Q7KZN9 410 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 MOB1BQ7L9L4 216 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 PRICKLE2Q7Z3G6 844 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 MDGA2Q7Z553 956 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 FJX1Q86VR8 437 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 WDR83Q9BRX9 315 aaKnown RBP6.22□□□□□ -1.41
USP46-201ENST00000441222 C16orf70Q9BSU1 422 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 RIMS4Q9H426 269 aaPredicted RBP6.22□□□□□ -1.41
USP46-201ENST00000441222 ZNF331Q9NQX6 463 aaPredicted RBP6.22□□□□□ -1.41
USP46-201ENST00000441222 RICTORQ6R327 1708 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 DIDO1Q9BTC0 2240 aaKnown RBP6.22□□□□□ -1.41
USP46-201ENST00000441222 FAM171A2A8MVW0 826 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 MAGEB4O15481 346 aaPredicted RBP6.22□□□□□ -1.41
USP46-201ENST00000441222 P2RY2P41231 377 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 CSNK1DP48730 415 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 WNT7BP56706 349 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 TAF9Q16594 264 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 YIF1BQ5BJH7 314 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 OR5AR1Q8NGP9 310 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 TFAP2CQ92754 450 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 CDS1Q92903 461 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 NEIL2Q969S2 332 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 ZNF416Q9BWM5 594 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 MMP28Q9H239 520 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 OR51B6Q9H340 312 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 C1GALT1Q9NS00 363 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 NECAP2Q9NVZ3 263 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 PGAP2Q9UHJ9 254 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 KCND3Q9UK17 655 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 PUS1Q9Y606 427 aaKnown RBP eCLIP6.22□□□□□ -1.41
USP46-201ENST00000441222 RGPD5Q99666 1765 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 CKAP5Q14008 2032 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 RALGAPA1Q6GYQ0 2036 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 FAM72CH0Y354 149 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 TNFSF12O43508 249 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 SUSD5O60279 629 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 NSA2O95478 260 aaKnown RBP6.22□□□□□ -1.41
USP46-201ENST00000441222 SNAI1O95863 264 aaPredicted RBP6.22□□□□□ -1.41
USP46-201ENST00000441222 SLURP2P0DP57 97 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 CPMP14384 443 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 FOLR1P15328 257 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 CD38P28907 300 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 BMI1P35226 326 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 CRMP1Q14194 572 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 FAM72AQ5TYM5 149 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 FAM72DQ6L9T8 149 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 IL34Q6ZMJ4 242 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 TMEM200AQ86VY9 491 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 FAM72BQ86X60 149 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 TCTE3Q8IZS6 198 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 OR8J2Q8NGG1 315 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 ZPBPQ9BS86 351 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 TMEM43Q9BTV4 400 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 SLC25A18Q9H1K4 315 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 NRIP3Q9NQ35 241 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 HSFX1Q9UBD0 423 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 CHRNA9Q9UGM1 479 aa6.22□□□□□ -1.41
USP46-201ENST00000441222 NOSIPQ9Y314 301 aaKnown RBP6.22□□□□□ -1.41
USP46-201ENST00000441222 AP1G1O43747 822 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 CNIH1O95406 144 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 PSMB1P20618 241 aaKnown RBP6.21□□□□□ -1.41
USP46-201ENST00000441222 PTBP1P26599 531 aaKnown RBP eCLIP6.21□□□□□ -1.41
USP46-201ENST00000441222 RFX2P48378 723 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 POU3F1Q03052 451 aaPredicted RBP6.21□□□□□ -1.41
USP46-201ENST00000441222 NFATC4Q14934 902 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 C6orf132Q5T0Z8 1188 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 FAM57BQ71RH2 274 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 KANSL1Q7Z3B3 1105 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 ADIPOR2Q86V24 386 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 CLDN22Q8N7P3 220 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 SLC35G3Q8N808 338 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 SECTM1Q8WVN6 248 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 SMIM3Q9BZL3 60 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 GSTO2Q9H4Y5 243 aa6.21□□□□□ -1.41
USP46-201ENST00000441222 FKRPQ9H9S5 495 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms