RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 EFHD2Q96C19 240 aaPredicted RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 OMA1Q96E52 524 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 SLC47A1Q96FL8 570 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 TPD52L3Q96J77 140 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 C7orf34Q96L11 122 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 RNF145Q96MT1 663 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ARHGDIGQ99819 225 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 KLHDC3Q9BQ90 382 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 DOHHQ9BU89 302 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 CHID1Q9BWS9 393 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 MAGIXQ9H6Y5 334 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 UBTD1Q9HAC8 227 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 MMP25Q9NPA2 562 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 POLE3Q9NRF9 147 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 PNPLA3Q9NST1 481 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF701Q9NV72 531 aaPredicted RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ANKRD10Q9NXR5 420 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 STX18Q9P2W9 335 aaKnown RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 COPS7AQ9UBW8 275 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF629Q9UEG4 869 aaPredicted RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 RPS6KA6Q9UK32 745 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ABCG2Q9UNQ0 655 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 SAMD4AQ9UPU9 718 aaKnown RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF443Q9Y2A4 671 aaPredicted RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 WDR45Q9Y484 360 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 AP4S1Q9Y587 144 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 FAM215AQ9Y5M1 114 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 MED12LQ86YW9 2145 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 NUP214P35658 2090 aaPredicted RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 RYR3Q15413 4870 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 J3KTA2 159 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 FFAR1O14842 300 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 CASQ2O14958 399 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-206ENST00000441089 UGT2B11O75310 529 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 GMNNO75496 209 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 REM1O75628 298 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 OR2J2O76002 312 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 ZFAND5O76080 213 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 DIRAS1O95057 198 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 PRSS23O95084 383 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 STAMBPO95630 424 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 NTN1O95631 604 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 OXSR1O95747 527 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-206ENST00000441089 BAG2O95816 211 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 LGI1O95970 557 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 FESP07332 822 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 RAP2AP10114 183 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 PRG2P13727 222 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 HNF1AP20823 631 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 BMP5P22003 454 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 PSMA4P25789 261 aaKnown RBP4.27□□□□□ -1.73
PTPN4-206ENST00000441089 ABCD3P28288 659 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 PEX2P28328 305 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 PRKAR1BP31321 381 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 IDUAP35475 653 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 PTGDSP41222 190 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 YAP1P46937 504 aaKnown RBP4.27□□□□□ -1.73
PTPN4-206ENST00000441089 CYB561P49447 251 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF136P52737 540 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 ATP12AP54707 1039 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 SESN3P58005 492 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 HPCAP84074 193 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 HOXC5Q00444 222 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 SRSF2Q01130 221 aaKnown RBP4.27□□□□□ -1.73
PTPN4-206ENST00000441089 SLC34A1Q06495 639 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 PLCXD2Q0VAA5 305 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 PPP1R8Q12972 351 aaKnown RBP4.27□□□□□ -1.73
PTPN4-206ENST00000441089 GNA13Q14344 377 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 ZNHIT3Q15649 155 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-206ENST00000441089 CD226Q15762 336 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 ATP6AP1Q15904 470 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF141Q15928 474 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 EXT1Q16394 746 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 GRAMD1BQ3KR37 738 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 IFI44LQ53G44 452 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 KLHL26Q53HC5 615 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF311Q5JNZ3 666 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 PDZK1Q5T2W1 519 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 MRPL2Q5T653 305 aaKnown RBP4.27□□□□□ -1.73
PTPN4-206ENST00000441089 WLSQ5T9L3 541 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 LPCAT4Q643R3 524 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 RTL6Q6ICC9 239 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 PLEKHM3Q6ZWE6 761 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 FKBP9P1Q75LS8 142 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 SLC29A4Q7RTT9 530 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 PIWIL3Q7Z3Z3 882 aaKnown RBP4.27□□□□□ -1.73
PTPN4-206ENST00000441089 TMEM179BQ7Z7N9 219 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 CARM1Q86X55 608 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 ARMC8Q8IUR7 673 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 EPHX4Q8IUS5 362 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 ZDHHC21Q8IVQ6 265 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 PQLC1Q8N2U9 271 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 RFLNBQ8N5W9 214 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 ZFP62Q8NB50 900 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-206ENST00000441089 RELL2Q8NC24 303 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-206ENST00000441089 C17orf47Q8NEP4 570 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 OR6T1Q8NGN1 323 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 OR5M9Q8NGP3 310 aa4.27□□□□□ -1.73
PTPN4-206ENST00000441089 VANGL1Q8TAA9 524 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms