RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 HIST1H2ABP04908 130 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 PRF1P14222 555 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 NQO1P15559 274 aaKnown RBP10.45□□□□□ -0.74
HSPG2-206ENST00000439717 ZNF43P17038 809 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 ITGA2P17301 1181 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 RHCEP18577 417 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 COX5AP20674 150 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 PTNP21246 168 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 CBLP22681 906 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 YAP1P46937 504 aaKnown RBP10.45□□□□□ -0.74
HSPG2-206ENST00000439717 UGT2B15P54855 530 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 TLE4Q04727 773 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 C1DQ13901 141 aaKnown RBP10.45□□□□□ -0.74
HSPG2-206ENST00000439717 MS4A18Q3C1V0 323 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 DNAL1Q4LDG9 190 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 HIST3H2AQ7L7L0 130 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 CXorf67Q86X51 503 aaPredicted RBP10.45□□□□□ -0.74
HSPG2-206ENST00000439717 KDM8Q8N371 416 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 POMGNT2Q8NAT1 580 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 OR5J2Q8NH18 312 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 TMEM255BQ8WV15 326 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 HIST1H2ACQ93077 130 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 KISS1RQ969F8 398 aaPredicted RBP10.45□□□□□ -0.74
HSPG2-206ENST00000439717 POP5Q969H6 163 aaKnown RBP10.45□□□□□ -0.74
HSPG2-206ENST00000439717 C7orf34Q96L11 122 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 WFIKKN1Q96NZ8 548 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 ZNF385AQ96PM9 386 aaKnown RBP10.45□□□□□ -0.74
HSPG2-206ENST00000439717 MED18Q9BUE0 208 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 ANKRD19PQ9H560 264 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 MCCC2Q9HCC0 563 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 MEPEQ9NQ76 525 aaPredicted RBP10.45□□□□□ -0.74
HSPG2-206ENST00000439717 ASB6Q9NWX5 421 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 SEC14L4Q9UDX3 406 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 MALT1Q9UDY8 824 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 RCE1Q9Y256 329 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 MED31Q9Y3C7 131 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 FAM32AQ9Y421 112 aaKnown RBP10.45□□□□□ -0.74
HSPG2-206ENST00000439717 NOX1Q9Y5S8 564 aa10.45□□□□□ -0.74
HSPG2-206ENST00000439717 FAM221AA4D161 298 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 A6NNC1 897 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 ENO4A6NNW6 628 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 LRRN3E7EW58 273 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 J3KTA2 159 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 KPNA4O00629 521 aaPredicted RBP10.44□□□□□ -0.74
HSPG2-206ENST00000439717 PLPP3O14495 311 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 GYG2O15488 501 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 AKAP8O43823 692 aaKnown RBP10.44□□□□□ -0.74
HSPG2-206ENST00000439717 OR7A10O76100 309 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 OR6A2O95222 327 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 SEMG1P04279 462 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 ASAH2BP0C7U1 165 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 IL32P24001 234 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 EDNRAP25101 427 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 IL1RL1Q01638 556 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 PUDPQ08623 228 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 ZP4Q12836 540 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 TRIM25Q14258 630 aaKnown RBP10.44□□□□□ -0.74
HSPG2-206ENST00000439717 LCN8Q6JVE9 175 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 SSX8Q7RTT4 187 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.44□□□□□ -0.74
HSPG2-206ENST00000439717 ABHD12BQ7Z5M8 362 aaPredicted RBP10.44□□□□□ -0.74
HSPG2-206ENST00000439717 TSEN54Q7Z6J9 526 aaKnown RBP10.44□□□□□ -0.74
HSPG2-206ENST00000439717 PXKQ7Z7A4 578 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 UEVLDQ8IX04 471 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 RNF113BQ8IZP6 322 aaKnown RBP10.44□□□□□ -0.74
HSPG2-206ENST00000439717 UBE2J2Q8N2K1 259 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 FAM86B1Q8N7N1 296 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 PIK3C3Q8NEB9 887 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 PFN4Q8NHR9 129 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 LIPHQ8WWY8 451 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 ACOT11Q8WXI4 607 aaPredicted RBP10.44□□□□□ -0.74
HSPG2-206ENST00000439717 MCUR1Q96AQ8 359 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 SGTBQ96EQ0 304 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 ACTR6Q9GZN1 396 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 SLCO5A1Q9H2Y9 848 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 NMNAT1Q9HAN9 279 aaPredicted RBP10.44□□□□□ -0.74
HSPG2-206ENST00000439717 MAN2C1Q9NTJ4 1040 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 TAS2R16Q9NYV7 291 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 NDUFAF4Q9P032 175 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 UPB1Q9UBR1 384 aa10.44□□□□□ -0.74
HSPG2-206ENST00000439717 MPDZO75970 2070 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 A0A1W2PRQ8 180 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 PDLIM1O00151 329 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 TRAF3IP2O43734 574 aaPredicted RBP10.43□□□□□ -0.74
HSPG2-206ENST00000439717 CTAG2O75638 210 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 ATP5HO75947 161 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 PDE5AO76074 875 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 STAMBPO95630 424 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 HPRP00739 348 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 IGHV3-9P01782 118 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 H1F0P07305 194 aaKnown RBP10.43□□□□□ -0.74
HSPG2-206ENST00000439717 ADORA3P0DMS8 318 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 UMPSP11172 480 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 FUT1P19526 365 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 CRYGSP22914 178 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 IGHV1-2P23083 117 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 RASSF2P50749 326 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 CLDN17P56750 224 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 VLDLRP98155 873 aa10.43□□□□□ -0.74
HSPG2-206ENST00000439717 FAPQ12884 760 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms