RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 DCTN3O75935 186 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 ATE1O95260 518 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 WNT11O96014 354 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 CD53P19397 219 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 DRD4P21917 467 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 EDNRAP25101 427 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 PTAFRP25105 342 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 NTF4P34130 210 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 P2RY4P51582 365 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 CLDN17P56750 224 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 PRPS1P60891 318 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 LIPEQ05469 1076 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 TESK1Q15569 626 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 GABRA6Q16445 453 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 CYBRD1Q53TN4 286 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 SHEQ5VZ18 495 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 ADAM5Q6NVV9 412 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 TMEM108Q6UXF1 575 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 LINC00114Q6XXX2 140 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 RBM45Q8IUH3 476 aaKnown RBP9.22□□□□□ -0.93
MCF2L-216ENST00000439475 P3H2Q8IVL5 708 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 GPR137CQ8N3F9 429 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 ZNF611Q8N823 705 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 ZIC4Q8N9L1 334 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 PIK3C3Q8NEB9 887 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 OR5J2Q8NH18 312 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 OR52N5Q8NH56 324 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 TMEM171Q8WVE6 324 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 SLC41A3Q96GZ6 507 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 TPD52L3Q96J77 140 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 HS6ST2Q96MM7 605 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 HS3ST6Q96QI5 342 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 CCL19Q99731 98 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 WFDC6Q9BQY6 131 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 LINC00470Q9BZP3 86 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 PCDHAC1Q9H158 963 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 CXXC4Q9H2H0 198 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 OBP2BQ9NPH6 170 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 NANSQ9NR45 359 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 CMTM6Q9NX76 183 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 MRPL39Q9NYK5 338 aaKnown RBP9.22□□□□□ -0.93
MCF2L-216ENST00000439475 SLC7A7Q9UM01 511 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 ARL2BPQ9Y2Y0 163 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 NOX1Q9Y5S8 564 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 DSCAMO60469 2012 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 A0A1W2PPR1 153 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 HTR3EA5X5Y0 456 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 MS4A18H0YCH9 400 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 PDLIM1O00151 329 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 CXCR6O00574 342 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 HS3ST1O14792 307 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 CLOCKO15516 846 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 SMPD2O60906 423 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 FZD7O75084 574 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 OR5F1O95221 314 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 BGLAPP02818 100 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 ITGA5P08648 1049 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 ADORA3P0DMS8 318 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 THRBP10828 461 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 UMPSP11172 480 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 HOXB1P14653 301 aaPredicted RBP9.21□□□□□ -0.94
MCF2L-216ENST00000439475 CDH2P19022 906 aaPredicted RBP9.21□□□□□ -0.94
MCF2L-216ENST00000439475 AHCYP23526 432 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 LOXP28300 417 aaPredicted RBP9.21□□□□□ -0.94
MCF2L-216ENST00000439475 RBM34P42696 430 aaKnown RBP9.21□□□□□ -0.94
MCF2L-216ENST00000439475 SELENOPP49908 381 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 SLC7A2P52569 658 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 UBE2NP61088 152 aaKnown RBP9.21□□□□□ -0.94
MCF2L-216ENST00000439475 PSME3P61289 254 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 PUDPQ08623 228 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 ST3GAL3Q11203 375 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 MS4A18Q3C1V0 323 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 C9orf135Q5VTT2 229 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 DEF8Q6ZN54 512 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 FKBP9P1Q75LS8 142 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 PXKQ7Z7A4 578 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 TREML1Q86YW5 311 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 LRRC75A-AS1Q8N1F1 130 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 ANKK1Q8NFD2 765 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 OR4D11Q8NGI4 311 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 AKAP1Q92667 903 aaKnown RBP eCLIP9.21□□□□□ -0.94
MCF2L-216ENST00000439475 LRRC37BQ96QE4 947 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 TMEM204Q9BSN7 226 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 MYLK2Q9H1R3 596 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 ALG2Q9H553 416 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 FKRPQ9H9S5 495 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 MOV10Q9HCE1 1003 aaKnown RBP9.21□□□□□ -0.94
MCF2L-216ENST00000439475 B3GAT2Q9NPZ5 323 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 RIMS3Q9UJD0 308 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 SLC25A15Q9Y619 301 aa9.21□□□□□ -0.94
MCF2L-216ENST00000439475 DPRXA6NFQ7 191 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 CH25HO95992 272 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 GYS2P54840 703 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 SH3BGRP55822 239 aaPredicted RBP9.2□□□□□ -0.94
MCF2L-216ENST00000439475 NKX6-1P78426 367 aaPredicted RBP9.2□□□□□ -0.94
MCF2L-216ENST00000439475 LTBQ06643 244 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 ZP4Q12836 540 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 PIGWQ7Z7B1 504 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 PIAS4Q8N2W9 510 aaPredicted RBP9.2□□□□□ -0.94
MCF2L-216ENST00000439475 FBXW5Q969U6 566 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms