RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 PLEKHN1Q494U1 663 aaPredicted RBP6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 C1orf140Q5VVS0 124 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 RAET1LQ5VY80 246 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 TMEM236Q5W0B7 351 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 ZNF620Q6ZNG0 422 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 RASSF6Q6ZTQ3 369 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 USP51Q70EK9 711 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 CCDC71Q8IV32 467 aaPredicted RBP6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 CDK20Q8IZL9 346 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 DHRSXQ8N5I4 330 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 RBMXL3Q8N7X1 1067 aaKnown RBP6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 OR8D4Q8NGM9 314 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 OR6S1Q8NH40 331 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 OR51A7Q8NH64 312 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 OR14L1PQ8NHC6 308 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 DNAJA3Q96EY1 480 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 ARL5BQ96KC2 179 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 TNFRSF13CQ96RJ3 184 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 PIGQQ9BRB3 760 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 ADI1Q9BV57 179 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 POTEKPQ9BYX7 375 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 PLA2G12AQ9BZM1 189 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 TMEM185BQ9H7F4 350 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 MCCC2Q9HCC0 563 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 KRCC1Q9NPI7 259 aaPredicted RBP6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 SERINC1Q9NRX5 453 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 IL20Q9NYY1 176 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 B4GALT7Q9UBV7 327 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 FBXL7Q9UJT9 491 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 RAB26Q9ULW5 256 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 SIGLEC7Q9Y286 467 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 TP53TG5Q9Y2B4 290 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 ZNF281Q9Y2X9 895 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 ORC6Q9Y5N6 252 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 AP4B1Q9Y6B7 739 aa6.32□□□□□ -1.4
LSM3P3-201ENST00000436601 DCHS1Q96JQ0 3298 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 TRAV27A0A087WT01 109 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 LOC100130705A0A1B0GUX0 176 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 LIPT2A6NK58 231 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 ZAR1LA6NP61 321 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 H3BML4 177 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 FZD7O75084 574 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 AHSA1O95433 338 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 CLIC3O95833 236 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 MT-ATP6P00846 226 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 TSPAN19P0C672 248 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 SAGP10523 405 aaPredicted RBP6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 TFPIP10646 304 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 CDH2P19022 906 aaPredicted RBP6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 FKBP2P26885 142 aaKnown RBP6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 POU1F1P28069 291 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 ELK4P28324 431 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 CAPGP40121 348 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 STARP49675 285 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 CLK1P49759 484 aaKnown RBP6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 CLDN15P56746 228 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 RPS4XP62701 263 aaKnown RBP6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 CDK5Q00535 292 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 MYBPHQ13203 477 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 SELENBP1Q13228 472 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 SLC10A1Q14973 349 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 TMEM176BQ3YBM2 270 aaPredicted RBP6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 ZBED5Q49AG3 693 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 GXYLT1Q4G148 440 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 SYT14P1Q58G82 188 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 WLSQ5T9L3 541 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 C3orf33Q6P1S2 294 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 C5orf46Q6UWT4 87 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 ASB18Q6ZVZ8 466 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 TRILQ7L0X0 811 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 OAFQ86UD1 273 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 SLC22A16Q86VW1 577 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 CHERPQ8IWX8 916 aaKnown RBP6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 FAM109AQ8N4B1 249 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 C10orf53Q8N6V4 93 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 CLDN22Q8N7P3 220 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 LRRC75AQ8NAA5 344 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 ZNF555Q8NEP9 628 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 OR4Q3Q8NH05 313 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 MOSPD2Q8NHP6 518 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 MFSD8Q8NHS3 518 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 SLC25A43Q8WUT9 341 aaPredicted RBP6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 CYGBQ8WWM9 190 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 SLC25A36Q96CQ1 311 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 DDIT4LQ96D03 193 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 HRASLS5Q96KN8 279 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 SAMD8Q96LT4 415 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 SFXN2Q96NB2 322 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 MUS81Q96NY9 551 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 TAAR6Q96RI8 345 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 PITX2Q99697 317 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 ANKRD60Q9BZ19 345 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 DEFB127Q9H1M4 99 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 SLC6A15Q9H2J7 730 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 PRORYQ9H606 182 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 ZDHHC11Q9H8X9 412 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 FKRPQ9H9S5 495 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 ACKR4Q9NPB9 350 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 NANSQ9NR45 359 aa6.31□□□□□ -1.4
LSM3P3-201ENST00000436601 QPCTLQ9NXS2 382 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms