RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 MESP2Q0VG99 397 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 APOFQ13790 326 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 ITGA9Q13797 1035 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 FAM174BQ3ZCQ3 159 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 PTPN20Q4JDL3 420 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 FAM46CQ5VWP2 391 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 TMEM225Q6GV28 225 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 KRTAP5-3Q6L8H2 238 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 ACSM6Q6P461 480 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 FAM198BQ6UWH4 519 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 DEF8Q6ZN54 512 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 Q6ZVL8 140 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 IL17RELQ6ZVW7 336 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 FCRLAQ7L513 359 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 CHSY1Q86X52 802 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 XYLT1Q86Y38 959 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 CRLF3Q8IUI8 442 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 Q8N1Y9 231 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 PQLC1Q8N2U9 271 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 Q8N402 240 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 STX19Q8N4C7 294 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 SPATA6LQ8N4H0 392 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 C8orf31Q8N9H6 132 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 OR7G2Q8NG99 324 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 PROKR1Q8TCW9 393 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 MRAPQ8TCY5 172 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 ASB11Q8WXH4 323 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 OVCA2Q8WZ82 227 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 TM9SF4Q92544 642 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 UFD1Q92890 307 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 PPWD1Q96BP3 646 aaKnown RBP5.04□□□□□ -1.6
RFC3-202ENST00000434425 TMEM56Q96MV1 263 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 MCEEQ96PE7 176 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 RNF2Q99496 336 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 LMF2Q9BU23 707 aaKnown RBP5.04□□□□□ -1.6
RFC3-202ENST00000434425 DUSP23Q9BVJ7 150 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 PITPNM3Q9BZ71 974 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 FN3KQ9H479 309 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 C10orf88Q9H8K7 445 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 RANGRFQ9HD47 186 aaPredicted RBP5.04□□□□□ -1.6
RFC3-202ENST00000434425 FZD3Q9NPG1 666 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 TMEM9BQ9NQ34 198 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 SAR1AQ9NR31 198 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 TMEM74BQ9NUR3 256 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 PLEKHJ1Q9NW61 149 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 XPR1Q9UBH6 696 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 NXT1Q9UKK6 140 aaKnown RBP5.04□□□□□ -1.6
RFC3-202ENST00000434425 PRPF19Q9UMS4 504 aaKnown RBP5.04□□□□□ -1.6
RFC3-202ENST00000434425 A4GNTQ9UNA3 340 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 MOKQ9UQ07 419 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 TMEM56-RWDD3S4R434 201 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 CFAP46Q8IYW2 2715 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 KNTC1P50748 2209 aa5.04□□□□□ -1.6
RFC3-202ENST00000434425 YLPM1P49750 1951 aaKnown RBP5.03□□□□□ -1.6
RFC3-202ENST00000434425 SHROOM3Q8TF72 1996 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 SPAARA0A1B0GVQ0 90 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 FAM95CA0A1B0GW59 222 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 SHISA3A0PJX4 238 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 SMCO3A2RU48 225 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 TMEM8BA6NDV4 472 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 FAM90A10PA6NDY2 464 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 CLDN34H7C241 214 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 PSMD12O00232 456 aaPredicted RBP5.03□□□□□ -1.6
RFC3-202ENST00000434425 SIVA1O15304 175 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 CCDC22O60826 627 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 HUS1O60921 280 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 SLC25A12O75746 678 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 DCTN3O75935 186 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 SRP72O76094 671 aaKnown RBP5.03□□□□□ -1.6
RFC3-202ENST00000434425 FGF19O95750 216 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 SERPINA1P01009 418 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 GRPP07492 148 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 ZSCAN5DPP0CG00 497 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 HMGA1P17096 107 aaKnown RBP5.03□□□□□ -1.6
RFC3-202ENST00000434425 BGNP21810 368 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 ACADLP28330 430 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 SSTR2P30874 369 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 CALCRP30988 508 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 RCVRNP35243 200 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 ADMP35318 185 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 GDNFP39905 211 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 OR3A3P47888 321 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 KPNA2P52292 529 aaKnown RBP5.03□□□□□ -1.6
RFC3-202ENST00000434425 DGKQP52824 942 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 PLA2G16P53816 162 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 EEFSECP57772 596 aaKnown RBP5.03□□□□□ -1.6
RFC3-202ENST00000434425 RAP1BP61224 184 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 KCNJ2P63252 427 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 DHODHQ02127 395 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 SLC18A2Q05940 514 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 KRR1Q13601 381 aaKnown RBP5.03□□□□□ -1.6
RFC3-202ENST00000434425 TFDP2Q14188 446 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 TNXAQ16473 311 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 HAGHQ16775 308 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 MEP1AQ16819 746 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 MGAT5BQ3V5L5 792 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 TIGD2Q4W5G0 525 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 RUNDC3AQ59EK9 446 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 C9orf135Q5VTT2 229 aa5.03□□□□□ -1.6
RFC3-202ENST00000434425 DCAF12L2Q5VW00 463 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms