RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 CLOCKO15516 846 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 AKAP8O43823 692 aaKnown RBP8.63□□□□□ -1.03
HDAC6-207ENST00000430858 SNX3O60493 162 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 TMCC2O75069 709 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 PLAUP00749 431 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 MT-ATP6P00846 226 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 BGLAPP02818 100 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 NQO1P15559 274 aaKnown RBP8.63□□□□□ -1.03
HDAC6-207ENST00000430858 HOXC12P31275 282 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 LSP1P33241 339 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 KDELR2P33947 212 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 SELENOPP49908 381 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 FOXG1P55316 489 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-207ENST00000430858 CLDN17P56750 224 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 GABRA6Q16445 453 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 TTC33Q6PID6 262 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-207ENST00000430858 HACD2Q6Y1H2 254 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 CPLX4Q7Z7G2 160 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 CARM1Q86X55 608 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 TGIF2LYQ8IUE0 185 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 RBM45Q8IUH3 476 aaKnown RBP8.63□□□□□ -1.03
HDAC6-207ENST00000430858 P3H2Q8IVL5 708 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 SLC15A3Q8IY34 581 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 MICU2Q8IYU8 434 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 LRRC75A-AS1Q8N1F1 130 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 KDM8Q8N371 416 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 ZNF611Q8N823 705 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 OR52N5Q8NH56 324 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 AKAP1Q92667 903 aaKnown RBP eCLIP8.63□□□□□ -1.03
HDAC6-207ENST00000430858 BOD1Q96IK1 185 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 LINC00470Q9BZP3 86 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 SLC19A3Q9BZV2 496 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 POLR2J2Q9GZM3 115 aaKnown RBP8.63□□□□□ -1.03
HDAC6-207ENST00000430858 FAM107BQ9H098 131 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 POLR2J3Q9H1A7 115 aaKnown RBP8.63□□□□□ -1.03
HDAC6-207ENST00000430858 MYLK2Q9H1R3 596 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 CMTM6Q9NX76 183 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 MRPL39Q9NYK5 338 aaKnown RBP8.63□□□□□ -1.03
HDAC6-207ENST00000430858 SEC14L4Q9UDX3 406 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 SLC7A7Q9UM01 511 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 USP22Q9UPT9 525 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 AMDHD2Q9Y303 409 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 SH3GLB1Q9Y371 365 aa8.63□□□□□ -1.03
HDAC6-207ENST00000430858 ANKRD17O75179 2603 aaKnown RBP8.62□□□□□ -1.03
HDAC6-207ENST00000430858 SMPD2O60906 423 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 ZNF432O94892 652 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 LYPD3O95274 346 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 THY1P04216 161 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 DRD4P21917 467 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 CBLP22681 906 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 PAX7P23759 505 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 PTAFRP25105 342 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 PRDX6P30041 224 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 GNGT1P63211 74 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 IL1RL1Q01638 556 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 LTBQ06643 244 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 BSPH1Q075Z2 132 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 PUDPQ08623 228 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 PMS2P3Q13401 168 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 ZNF672Q499Z4 452 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-207ENST00000430858 LRRC23Q53EV4 343 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-207ENST00000430858 C9orf135Q5VTT2 229 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 SHEQ5VZ18 495 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 C8orf82Q6P1X6 216 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-207ENST00000430858 KLHL17Q6TDP4 642 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 KLHL24Q6TFL4 600 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 TMEM108Q6UXF1 575 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 WDR88Q6ZMY6 472 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 TREML1Q86YW5 311 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 UEVLDQ8IX04 471 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 C10orf53Q8N6V4 93 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 WDR31Q8NA23 367 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 ANKK1Q8NFD2 765 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 FBXW5Q969U6 566 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 RADILQ96JH8 1075 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 MOGAT1Q96PD6 335 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 ALKBH3Q96Q83 286 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-207ENST00000430858 ZNF426Q9BUY5 554 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 CXorf56Q9H5V9 222 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 OBP2BQ9NPH6 170 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 SLC17A5Q9NRA2 495 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 NPAP1Q9NZP6 1156 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 MGAT4BQ9UQ53 548 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 NOX1Q9Y5S8 564 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 MAGED1Q9Y5V3 778 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-207ENST00000430858 OTOGQ6ZRI0 2925 aa8.62□□□□□ -1.03
HDAC6-207ENST00000430858 A0A1W2PR80 420 aa8.61□□□□□ -1.03
HDAC6-207ENST00000430858 MS4A18H0YCH9 400 aa8.61□□□□□ -1.03
HDAC6-207ENST00000430858 RPL36A-HNRNPH2H7BZ11 118 aa8.61□□□□□ -1.03
HDAC6-207ENST00000430858 PLPP3O14495 311 aa8.61□□□□□ -1.03
HDAC6-207ENST00000430858 ABCD4O14678 606 aa8.61□□□□□ -1.03
HDAC6-207ENST00000430858 ARHGEF9O43307 516 aa8.61□□□□□ -1.03
HDAC6-207ENST00000430858 TRAF3IP2O43734 574 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-207ENST00000430858 SLC43A1O75387 559 aa8.61□□□□□ -1.03
HDAC6-207ENST00000430858 UPK3AO75631 287 aa8.61□□□□□ -1.03
HDAC6-207ENST00000430858 OR5F1O95221 314 aa8.61□□□□□ -1.03
HDAC6-207ENST00000430858 WNT11O96014 354 aa8.61□□□□□ -1.03
HDAC6-207ENST00000430858 CD99P14209 185 aa8.61□□□□□ -1.03
HDAC6-207ENST00000430858 CDH2P19022 906 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-207ENST00000430858 PTNP21246 168 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms