RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 OC90Q02509 493 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 FGL2Q14314 439 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 GRB14Q14449 540 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ZNF311Q5JNZ3 666 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 C11orf87Q6NUJ2 197 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 FAHD2BQ6P2I3 314 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 ANKRD16Q6P6B7 361 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 THSD4Q6ZMP0 1018 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 PARGQ86W56 976 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 RELL2Q8NC24 303 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 GPX8Q8TED1 209 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 PPP1R1CQ8WVI7 109 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 FCAMRQ8WWV6 532 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 FAHD2AQ96GK7 314 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 MENTQ9BUN1 341 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 FNDC11Q9BVV2 318 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 CHST5Q9GZS9 411 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 BRD9Q9H8M2 597 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 SFXN1Q9H9B4 322 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 BCO1Q9HAY6 547 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 MMP26Q9NRE1 261 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 PARPBPQ9NWS1 579 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 SAGE1Q9NXZ1 904 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 STARD10Q9Y365 291 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 APCP25054 2843 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 TBC1D3EA0A087X179 549 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 TBC1D3KA0A087X1G2 549 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 IDSB3KWA1 339 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 NDUFS6O75380 124 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 ATP1B2P14415 290 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 NID1P14543 1247 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 P2RX1P51575 399 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ACTA2P62736 377 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ACTG2P63267 376 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 PJVKQ0ZLH3 352 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 OR2L13Q8N349 312 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 OR1J1Q8NGS3 322 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 RXFP4Q8TDU9 374 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 OVCA2Q8WZ82 227 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 RAB8BQ92930 207 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 SCLYQ96I15 445 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 CD180Q99467 661 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ARHGDIGQ99819 225 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 OPA3Q9H6K4 179 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ZNF806P0C7X5 589 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 ALPPL2P10696 532 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 LYL1P12980 280 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 SELLP14151 372 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 MUC1P15941 1255 aaPredicted RBP4.71□□□□□ -1.65
RIF1-203ENST00000428287 EPCAMP16422 314 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 ANXA7P20073 488 aaKnown RBP4.71□□□□□ -1.65
RIF1-203ENST00000428287 ACKR3P25106 362 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 OR12D2P58182 307 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 RPS15P62841 145 aaKnown RBP4.71□□□□□ -1.65
RIF1-203ENST00000428287 IL15RAQ13261 267 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 GGTLC2Q14390 218 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 PEA15Q15121 130 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 MST1LQ2TV78 715 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 C10orf120Q5SQS8 335 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 OR5D16Q8NGK9 328 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 ARL11Q969Q4 196 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 RAD51AP1Q96B01 352 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 ZNF681Q96N22 645 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 NAA11Q9BSU3 229 aaPredicted RBP4.71□□□□□ -1.65
RIF1-203ENST00000428287 BEX1Q9HBH7 125 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 ZCCHC3Q9NUD5 404 aaKnown RBP4.71□□□□□ -1.65
RIF1-203ENST00000428287 AHSPQ9NZD4 102 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 ERVK-19Q9WJR5 959 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 OTOGLQ3ZCN5 2332 aa4.71□□□□□ -1.65
RIF1-203ENST00000428287 NPIPB9F8W1W9 429 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 RHOCP08134 193 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 GKN3PP0CG01 181 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 PRLHRP49683 370 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 P2RY4P51582 365 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 ERVK-25P63136 954 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 UBE2IP63279 158 aaKnown RBP4.71□□□□□ -1.66
RIF1-203ENST00000428287 SDR9C7Q8NEX9 313 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 BBS1Q8NFJ9 593 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 OR2AP1Q8NGE2 309 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 OR5AK3PQ8NH89 298 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 C1orf216Q8TAB5 229 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 PLD4Q96BZ4 506 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 MS4A8Q9BY19 250 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 DUSP15Q9H1R2 295 aaPredicted RBP4.71□□□□□ -1.66
RIF1-203ENST00000428287 USP9XQ93008 2570 aaPredicted RBP4.71□□□□□ -1.66
RIF1-203ENST00000428287 A0A1B0GWJ7 208 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 BCL2L11O43521 198 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 SGCEO43556 437 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 CLN5O75503 358 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 RBBP9O75884 186 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 SPDEFO95238 335 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 CD14P08571 375 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 CEBPBP17676 345 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 ATP6V1E1P36543 226 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 EPHB3P54753 998 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 SRSF5Q13243 272 aaKnown RBP4.71□□□□□ -1.66
RIF1-203ENST00000428287 EIF5AL1Q6IS14 154 aaKnown RBP4.71□□□□□ -1.66
RIF1-203ENST00000428287 PRSS55Q6UWB4 352 aaPredicted RBP4.71□□□□□ -1.66
RIF1-203ENST00000428287 BAP18Q8IXM2 172 aa4.71□□□□□ -1.66
RIF1-203ENST00000428287 CFAP206Q8IYR0 622 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms