RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PROX1Q92786 737 aa8.07□□□□□ -1.12
SMC1A-203ENST00000428014 GTPBP3Q969Y2 492 aaKnown RBP8.07□□□□□ -1.12
SMC1A-203ENST00000428014 TAMM41Q96BW9 452 aa8.07□□□□□ -1.12
SMC1A-203ENST00000428014 MUCL1Q96DR8 90 aa8.07□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF300Q96RE9 604 aaPredicted RBP8.07□□□□□ -1.12
SMC1A-203ENST00000428014 KLHL4Q9C0H6 718 aa8.07□□□□□ -1.12
SMC1A-203ENST00000428014 SLCO5A1Q9H2Y9 848 aa8.07□□□□□ -1.12
SMC1A-203ENST00000428014 ANKRD19PQ9H560 264 aa8.07□□□□□ -1.12
SMC1A-203ENST00000428014 ESRP2Q9H6T0 727 aaKnown RBP8.07□□□□□ -1.12
SMC1A-203ENST00000428014 FKRPQ9H9S5 495 aa8.07□□□□□ -1.12
SMC1A-203ENST00000428014 STX18Q9P2W9 335 aaKnown RBP8.07□□□□□ -1.12
SMC1A-203ENST00000428014 FBXO9Q9UK97 447 aaPredicted RBP8.07□□□□□ -1.12
SMC1A-203ENST00000428014 AMDHD2Q9Y303 409 aa8.07□□□□□ -1.12
SMC1A-203ENST00000428014 NOX1Q9Y5S8 564 aa8.07□□□□□ -1.12
SMC1A-203ENST00000428014 HRNRQ86YZ3 2850 aaPredicted RBP8.07□□□□□ -1.12
SMC1A-203ENST00000428014 ITPR3Q14573 2671 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 HIVEP1P15822 2718 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 IGKV1D-42A0A075B6H8 117 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 TPST2O60704 377 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 DCTN3O75935 186 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF432O94892 652 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 ATE1O95260 518 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 ADAP00813 363 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 OPN1LWP04000 364 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 TSPAN19P0C672 248 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 DRD4P21917 467 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 PTAFRP25105 342 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 GTF2E2P29084 291 aaKnown RBP8.06□□□□□ -1.12
SMC1A-203ENST00000428014 SELPLGQ14242 412 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 OR7A5Q15622 319 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 ETFDHQ16134 617 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 RABL3Q5HYI8 236 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 NCMAPQ5T1S8 102 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 SHEQ5VZ18 495 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 SEZ6L2Q6UXD5 910 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 NHLRC1Q6VVB1 395 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 BHLHA15Q7RTS1 189 aaPredicted RBP8.06□□□□□ -1.12
SMC1A-203ENST00000428014 HDDC2Q7Z4H3 204 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 CXorf67Q86X51 503 aaPredicted RBP8.06□□□□□ -1.12
SMC1A-203ENST00000428014 MICU2Q8IYU8 434 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 ARHGAP24Q8N264 748 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 TMEM99Q8N816 258 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 OR6T1Q8NGN1 323 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 ADAMTS16Q8TE57 1224 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 THOC1Q96FV9 657 aaKnown RBP8.06□□□□□ -1.12
SMC1A-203ENST00000428014 ADAD1Q96M93 576 aaKnown RBP8.06□□□□□ -1.12
SMC1A-203ENST00000428014 MCHR1Q99705 422 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 ASPNQ9BXN1 380 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 SPAG4Q9NPE6 437 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 B3GAT1Q9P2W7 334 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF229Q9UJW7 825 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 CLEC4AQ9UMR7 237 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 ARL2BPQ9Y2Y0 163 aa8.06□□□□□ -1.12
SMC1A-203ENST00000428014 PRR14LQ5THK1 2151 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 ALPK2Q86TB3 2170 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 MTORP42345 2549 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 ARPC4-TTLL3A0A0A6YYG9 625 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 LOC100653049A0A140TA62 436 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.05□□□□□ -1.12
SMC1A-203ENST00000428014 KRT34O76011 436 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 BGLAPP02818 100 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 NR2C1P13056 603 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 ZNF43P17038 809 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 HOXB6P17509 224 aaKnown RBP8.05□□□□□ -1.12
SMC1A-203ENST00000428014 CD53P19397 219 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 IGHV1-2P23083 117 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 IST1P53990 364 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 CDH12P55289 794 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 RELBQ01201 579 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 PUDPQ08623 228 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 TAF11Q15544 211 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 TAB1Q15750 504 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 GABRA6Q16445 453 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 ACKR1Q16570 336 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 DEFB113Q30KQ7 82 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 GLIPR1L2Q4G1C9 344 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 PPP4R4Q6NUP7 873 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 KLHL17Q6TDP4 642 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 TMEM108Q6UXF1 575 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 AAED1Q7RTV5 226 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 CPLX4Q7Z7G2 160 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 DPPA2Q7Z7J5 298 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 COMTD1Q86VU5 262 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 EPHX4Q8IUS5 362 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 CCDC103Q8IW40 242 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 RNF113BQ8IZP6 322 aaKnown RBP8.05□□□□□ -1.12
SMC1A-203ENST00000428014 PIK3C3Q8NEB9 887 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 FNDC8Q8TC99 324 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 S100PBPQ96BU1 408 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 KTI12Q96EK9 354 aaPredicted RBP8.05□□□□□ -1.12
SMC1A-203ENST00000428014 LRRC37BQ96QE4 947 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 GSX2Q9BZM3 304 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 C12orf49Q9H741 205 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 GORASP2Q9H8Y8 452 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 ADPRHL2Q9NX46 363 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 FBXL3Q9UKT7 428 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 SLC25A15Q9Y619 301 aa8.05□□□□□ -1.12
SMC1A-203ENST00000428014 DSCAMO60469 2012 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 IGHV3-15A0A0B4J1V0 119 aa8.04□□□□□ -1.12
SMC1A-203ENST00000428014 LCE2BO14633 110 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms