RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 TRMT12Q53H54 448 aaKnown RBP9.8□□□□□ -0.84
TCOF1-204ENST00000427724 MARCH3Q86UD3 253 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 PTOV1Q86YD1 416 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 ADGRF3Q8IZF5 1079 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 TM9SF2Q99805 663 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 SLIRPQ9GZT3 109 aaKnown RBP9.8□□□□□ -0.84
TCOF1-204ENST00000427724 NUDT15Q9NV35 164 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 SIRT5Q9NXA8 310 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 COMMD9Q9P000 198 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 TCFL5Q9UL49 500 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 PCDHGB7Q9Y5F8 929 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 CXorf51AA0A1B0GTR3 108 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 GGT3PA6NGU5 568 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 FTCDNL1E5RQL4 147 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 GFYI3L273 518 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 DVL2O14641 736 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 DRD5P21918 477 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 TAGLNQ01995 201 aaKnown RBP9.8□□□□□ -0.84
TCOF1-204ENST00000427724 DUSP7Q16829 419 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 CFAP77Q6ZQR2 320 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 LINGO2Q7L985 606 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 WFDC8Q8IUA0 241 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 C10orf111Q8N326 155 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 GNPDA2Q8TDQ7 276 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 SGCZQ96LD1 299 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 OR2A14Q96R47 310 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 OR7D2Q96RA2 312 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 CLEC2DQ9UHP7 191 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 ADAM29Q9UKF5 820 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 PLXNA1Q9UIW2 1896 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 SPG11Q96JI7 2443 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 TSPAN11A1L157 253 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 FAM25EA8MYX2 175 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 WISP3O95389 354 aaPredicted RBP9.8□□□□□ -0.84
TCOF1-204ENST00000427724 UTS2O95399 124 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 ETHE1O95571 254 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 EML2O95834 649 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 INHBBP09529 407 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 ARAFP10398 606 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 CSNK1A1P48729 337 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 MALLQ13021 153 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 NTRK2Q16620 822 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 SLX4IPQ5VYV7 408 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 HBMQ6B0K9 141 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 ABHD12BQ7Z5M8 362 aaPredicted RBP9.8□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF547Q8IVP9 402 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 OR51L1Q8NGJ5 315 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 RFT1Q96AA3 541 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 ULBP2Q9BZM5 246 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 PARPBPQ9NWS1 579 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 GLS2Q9UI32 602 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 TBC1D24Q9ULP9 559 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 EXOSC1Q9Y3B2 195 aaKnown RBP9.8□□□□□ -0.84
TCOF1-204ENST00000427724 PCNX2A6NKB5 2137 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 CSTBP04080 98 aaKnown RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 ITGA5P08648 1049 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 HTR1AP08908 422 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 APLNRP35414 380 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 MNDAP41218 407 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 NAA10P41227 235 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 RPS5P46782 204 aaKnown RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 OR12D2P58182 307 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 ACER2Q5QJU3 275 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 BEST4Q8NFU0 473 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 OR4C15Q8NGM1 316 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 OR6F1Q8NGZ6 308 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 VRK1Q99986 396 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF559Q9BR84 538 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 GALNT9Q9HCQ5 603 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 NPAP1Q9NZP6 1156 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 LAMP5Q9UJQ1 280 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 POM121CA8CG34 1229 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 FABP7O15540 132 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 LCATP04180 440 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 APEX1P27695 318 aaKnown RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 GBX2P52951 348 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 POU3F1Q03052 451 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 DUSP2Q05923 314 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 EIF4EBP2Q13542 120 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 NKPD1Q17RQ9 610 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 CYB561A3Q8NBI2 242 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 OR2T33Q8NG76 320 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 SLC38A5Q8WUX1 472 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 THAP4Q8WY91 577 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 YIPF6Q96EC8 236 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 GPN1Q9HCN4 374 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 CNOT2Q9NZN8 540 aaKnown RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF69Q9UC07 566 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 RANBP2P49792 3224 aaKnown RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 TRAPPC13A5PLN9 417 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 SMAD9O15198 467 aaKnown RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 CTSVO60911 334 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 IGFBP1P08833 259 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 FURINP09958 794 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 H2BFMP0C1H6 154 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 BMP5P22003 454 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 SLC6A12P48065 614 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 AGFG1P52594 562 aaKnown RBP9.79□□□□□ -0.84
TCOF1-204ENST00000427724 WNT4P56705 351 aa9.79□□□□□ -0.84
TCOF1-204ENST00000427724 B3GNTL1Q67FW5 361 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms