RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 PDLIM1O00151 329 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 KPNA4O00629 521 aaPredicted RBP13.08□□□□□ -0.32
RTN4-210ENST00000427710 CLOCKO15516 846 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 OR2T1O43869 369 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 FMO6PO60774 539 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 UPK3AO75631 287 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 CNOT4O95628 575 aaKnown RBP13.08□□□□□ -0.32
RTN4-210ENST00000427710 HLA-DOBP13765 273 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 VEZF1Q14119 521 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 ACKR1Q16570 336 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 ZNF613Q6PF04 617 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 LINC00114Q6XXX2 140 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 LINGO2Q7L985 606 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 EFCAB1Q9HAE3 211 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 TAS2R16Q9NYV7 291 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 MALT1Q9UDY8 824 aa13.08□□□□□ -0.32
RTN4-210ENST00000427710 TRAPPC13A5PLN9 417 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 OR5H1A6NKK0 313 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 MS4A18H0YCH9 400 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 CHP2O43745 196 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 VAMP5O95183 116 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 NQO1P15559 274 aaKnown RBP13.07□□□□□ -0.32
RTN4-210ENST00000427710 ZNF43P17038 809 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 KDELR2P33947 212 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 ZNF83P51522 516 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 BSPH1Q075Z2 132 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 C1DQ13901 141 aaKnown RBP13.07□□□□□ -0.32
RTN4-210ENST00000427710 GABRA6Q16445 453 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 DEFB113Q30KQ7 82 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 MS4A18Q3C1V0 323 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 NCMAPQ5T1S8 102 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 C8orf82Q6P1X6 216 aaPredicted RBP13.07□□□□□ -0.32
RTN4-210ENST00000427710 C5orf46Q6UWT4 87 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 H1FNTQ75WM6 255 aaPredicted RBP13.07□□□□□ -0.32
RTN4-210ENST00000427710 WDFY1Q8IWB7 410 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 WDR31Q8NA23 367 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 LILRB1Q8NHL6 650 aaPredicted RBP13.07□□□□□ -0.32
RTN4-210ENST00000427710 RASSF5Q8WWW0 418 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 AKAP1Q92667 903 aaKnown RBP eCLIP13.07□□□□□ -0.32
RTN4-210ENST00000427710 SLC41A3Q96GZ6 507 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 OXGR1Q96P68 337 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 ALKBH3Q96Q83 286 aaPredicted RBP13.07□□□□□ -0.32
RTN4-210ENST00000427710 EPYCQ99645 322 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 FOXC2Q99958 501 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 PRSS27Q9BQR3 290 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 TMEM43Q9BTV4 400 aa13.07□□□□□ -0.32
RTN4-210ENST00000427710 C11orf98E9PRG8 122 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 DYNC1I1O14576 645 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 GSTA4O15217 222 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 FZD7O75084 574 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 SERPINI2O75830 405 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 KRT33AO76009 404 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 CH25HO95992 272 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 CD3EP07766 207 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 NCK1P16333 377 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 FUT4P22083 530 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 YAP1P46937 504 aaKnown RBP13.06□□□□□ -0.32
RTN4-210ENST00000427710 GSK3BP49841 420 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 NR1H2P55055 460 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 TAS2R41P59536 307 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 PSME3P61289 254 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 SLC25A3Q00325 362 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 PMS2P3Q13401 168 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 PIN1Q13526 163 aaPredicted RBP13.06□□□□□ -0.32
RTN4-210ENST00000427710 TIMM23BQ5SRD1 257 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 CARD17Q5XLA6 110 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 ADAM5Q6NVV9 412 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 TTC33Q6PID6 262 aaPredicted RBP13.06□□□□□ -0.32
RTN4-210ENST00000427710 ARPINQ7Z6K5 226 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 VTCN1Q7Z7D3 282 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 NKAIN4Q8IVV8 208 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 LRRC17Q8N6Y2 441 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 KBTBD8Q8NFY9 601 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 MBD6Q96DN6 1003 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 MUCL1Q96DR8 90 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 TXNDC15Q96J42 360 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 CCL19Q99731 98 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 HOPXQ9BPY8 73 aaPredicted RBP13.06□□□□□ -0.32
RTN4-210ENST00000427710 TMEM204Q9BSN7 226 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 EMC6Q9BV81 110 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 ASPNQ9BXN1 380 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 BAG5Q9UL15 447 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 EDARQ9UNE0 448 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 RNF115Q9Y4L5 304 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 SLC25A15Q9Y619 301 aa13.06□□□□□ -0.32
RTN4-210ENST00000427710 FLNAP21333 2647 aaKnown RBP13.06□□□□□ -0.32
RTN4-210ENST00000427710 CXCR6O00574 342 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 TRAF3IP2O43734 574 aaPredicted RBP13.05□□□□□ -0.32
RTN4-210ENST00000427710 MPGP29372 298 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 UGT2B15P54855 530 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 SPOCK1Q08629 439 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 HIKESHIQ53FT3 197 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 PHYHD1Q5SRE7 291 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 SWT1Q5T5J6 900 aaKnown RBP13.05□□□□□ -0.32
RTN4-210ENST00000427710 HACD2Q6Y1H2 254 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 PIGWQ7Z7B1 504 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 UEVLDQ8IX04 471 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 POMGNT2Q8NAT1 580 aa13.05□□□□□ -0.32
RTN4-210ENST00000427710 RBM15BQ8NDT2 890 aaKnown RBP13.05□□□□□ -0.32
RTN4-210ENST00000427710 PFN4Q8NHR9 129 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms