RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 OTPQ5XKR4 325 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 TIGD3Q6B0B8 471 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 OR52E8Q6IFG1 317 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 ZSCAN25Q6NSZ9 544 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 Q6ZN92 141 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 Q6ZPB1 254 aaPredicted RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 RGS9BPQ6ZS82 235 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 GDPD3Q7L5L3 318 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 VSTM4Q8IW00 320 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 OR2L13Q8N349 312 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 RNF175Q8N4F7 328 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 OR52M1Q8NGK5 317 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 OR2T3Q8NH03 318 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 FAM151AQ8WW52 585 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 UCN3Q969E3 161 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 EFHD2Q96C19 240 aaPredicted RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 TMEM101Q96IK0 257 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 SEC22AQ96IW7 307 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 CFAP53Q96M91 514 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 RBM14Q96PK6 669 aaKnown RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 PLEKHF1Q96S99 279 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 SECISBP2Q96T21 854 aaKnown RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 RNF2Q99496 336 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 NPAS2Q99743 824 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 TSG101Q99816 390 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 ARHGDIGQ99819 225 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF670Q9BS34 389 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 NIPSNAP3BQ9BS92 247 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 KRTAP4-3Q9BYR4 195 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 RAB34Q9BZG1 259 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 VCX2Q9H322 139 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 GORASP2Q9H8Y8 452 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 NHEJ1Q9H9Q4 299 aaPredicted RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 NANOGQ9H9S0 305 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 APMAPQ9HDC9 416 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 AIG1Q9NVV5 245 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 SMPD3Q9NY59 655 aaPredicted RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 BFARQ9NZS9 450 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 STAP1Q9ULZ2 295 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 CLEC4AQ9UMR7 237 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 PRPF19Q9UMS4 504 aaKnown RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 ERVW-1Q9UQF0 538 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 RPL36Q9Y3U8 105 aaKnown RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 MARF1Q9Y4F3 1742 aaKnown RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 TIMM10BQ9Y5J6 103 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 SLCO1B1Q9Y6L6 691 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 CDH10Q9Y6N8 788 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 LRRC7Q96NW7 1537 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 A0A1W2PP64 1363 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 KDRP35968 1356 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 PHRF1Q9P1Y6 1649 aaKnown RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 CDK12Q9NYV4 1490 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 ARHGAP23Q9P227 1491 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 XRN1Q8IZH2 1706 aaKnown RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 DIP2AQ14689 1571 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 EDC4Q6P2E9 1401 aaKnown RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 RIMS2Q9UQ26 1411 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 IGHV3OR16-13A0A075B7E8 117 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 A6NIZ1 184 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 PCP4L1A6NKN8 68 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 DCTN6O00399 190 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 MPHOSPH10O00566 681 aaKnown RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF780AO75290 641 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 SNNO75324 88 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 STAMBPO95630 424 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 OXSR1O95747 527 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 GIPP09681 153 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 CALRP27797 417 aaKnown RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 GNA11P29992 359 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 RFC4P35249 363 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 MAP3K8P41279 467 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 HLCSP50747 726 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 GPM6AP51674 278 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 HNRNPA3P51991 378 aaKnown RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 EFNB2P52799 333 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 PRPS1P60891 318 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 RAP1BP61224 184 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 GNB2P62879 340 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 TGFBR3Q03167 851 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 NCBP1Q09161 790 aaKnown RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 ASPHQ12797 758 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 IL24Q13007 206 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 C1orf61Q13536 156 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 IL17AQ16552 155 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 DPYSL2Q16555 572 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF630Q2M218 657 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-208ENST00000427110 EXOC3L2Q2M3D2 409 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 CCDC14Q49A88 953 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 GPRC6AQ5T6X5 926 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 CASC1Q6TDU7 716 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 RNF165Q6ZSG1 346 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 PGAP1Q75T13 922 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 UTS2BQ765I0 119 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 NLRP9Q7RTR0 991 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 PPP1R42Q7Z4L9 355 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 TBC1D21Q8IYX1 336 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 ACOT4Q8N9L9 421 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 DCAF4L2Q8NA75 395 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 STEAP2Q8NFT2 490 aa1.69□□□□□ -2.14
PTPRC-208ENST00000427110 OR4K14Q8NGD5 310 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms