RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 EVX1P49640 407 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 ARFIP2P53365 341 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 CLDN17P56750 224 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 COPZ1P61923 177 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 MYBPC1Q00872 1141 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 DEFA6Q01524 100 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 POU3F1Q03052 451 aaPredicted RBP12.62□□□□□ -0.39
PDAP1-202ENST00000426447 EMX2Q04743 252 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 EPS8Q12929 822 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 ANXA8L1Q5VT79 327 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 SHISA2Q6UWI4 295 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 MDP1Q86V88 176 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 KDM8Q8N371 416 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 GPR137CQ8N3F9 429 aa12.62□□□□□ -0.39
PDAP1-202ENST00000426447 MRPL24Q96A35 216 aaKnown RBP12.62□□□□□ -0.39
PDAP1-202ENST00000426447 MRPL37Q9BZE1 423 aaKnown RBP12.62□□□□□ -0.39
PDAP1-202ENST00000426447 NOP53Q9NZM5 478 aaKnown RBP12.62□□□□□ -0.39
PDAP1-202ENST00000426447 PRAMEF27A3QJZ7 478 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 WNT9BO14905 357 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 TMPRSS2O15393 492 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 SLC43A1O75387 559 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 ZNF43P17038 809 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 ALDH3B1P43353 468 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 P2RY4P51582 365 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 SYPL1Q16563 259 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 MRPL2Q5T653 305 aaKnown RBP12.61□□□□□ -0.39
PDAP1-202ENST00000426447 GKAP1Q5VSY0 366 aaPredicted RBP12.61□□□□□ -0.39
PDAP1-202ENST00000426447 C1orf140Q5VVS0 124 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 SAXO2Q658L1 398 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 CCDC36Q8IYA8 594 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 ZNF440Q8IYI8 595 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 BPIFB2Q8N4F0 458 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 ANKFN1Q8N957 763 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 ANKK1Q8NFD2 765 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 OR8J2Q8NGG1 315 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 SLC25A36Q96CQ1 311 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 NEURL3Q96EH8 262 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 TRNT1Q96Q11 434 aaKnown RBP12.61□□□□□ -0.39
PDAP1-202ENST00000426447 SYT3Q9BQG1 590 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 SLC35A5Q9BS91 424 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 MECRQ9BV79 373 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 ZNF747Q9BV97 191 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 RACGAP1Q9H0H5 632 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 ZNF696Q9H7X3 374 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 GPR35Q9HC97 309 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 SLC52A3Q9NQ40 469 aa12.61□□□□□ -0.39
PDAP1-202ENST00000426447 ZNF275Q9NSD4 429 aaPredicted RBP12.61□□□□□ -0.39
PDAP1-202ENST00000426447 NUP214P35658 2090 aaPredicted RBP12.61□□□□□ -0.39
PDAP1-202ENST00000426447 RPL36A-HNRNPH2H7BZ11 118 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 HMGN4O00479 90 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 DBIP07108 87 aaKnown RBP12.6□□□□□ -0.39
PDAP1-202ENST00000426447 TFPTP0C1Z6 253 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 GKN3PP0CG01 181 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 CD79AP11912 226 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 NCF2P19878 526 aaPredicted RBP12.6□□□□□ -0.39
PDAP1-202ENST00000426447 GTF2E2P29084 291 aaKnown RBP12.6□□□□□ -0.39
PDAP1-202ENST00000426447 ANXA11P50995 505 aaKnown RBP12.6□□□□□ -0.39
PDAP1-202ENST00000426447 SEC24CP53992 1094 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 LMO4P61968 165 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 FOXL1Q12952 345 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 C1DQ13901 141 aaKnown RBP12.6□□□□□ -0.39
PDAP1-202ENST00000426447 CEACAM16Q2WEN9 425 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 TRMT5Q32P41 509 aaKnown RBP12.6□□□□□ -0.39
PDAP1-202ENST00000426447 WBP2NLQ6ICG8 309 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 ACSM5Q6NUN0 579 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 LRRC74BQ6ZQY2 392 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 RNF130Q86XS8 419 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 RIBC1Q8N443 379 aaPredicted RBP12.6□□□□□ -0.39
PDAP1-202ENST00000426447 SLC6A7Q99884 636 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 ZNF416Q9BWM5 594 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 SLC38A1Q9H2H9 487 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 DDX28Q9NUL7 540 aaKnown RBP12.6□□□□□ -0.39
PDAP1-202ENST00000426447 RLIMQ9NVW2 624 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 DUSP13Q9UII6 198 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 ZDHHC2Q9UIJ5 367 aa12.6□□□□□ -0.39
PDAP1-202ENST00000426447 ZNF503-AS2A6NEH8 195 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 FRS3O43559 492 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 SEC14L2O76054 403 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 ZNF432O94892 652 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 AHSA1O95433 338 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 AVPP01185 164 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 SHBGP04278 402 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 GSNP06396 782 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 NR2F1P10589 423 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 GALK2Q01415 458 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 PIGFQ07326 219 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 MAD2L1BPQ15013 274 aaPredicted RBP12.59□□□□□ -0.39
PDAP1-202ENST00000426447 ATG16L1Q676U5 607 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 C1orf229Q6ZS94 237 aaPredicted RBP12.59□□□□□ -0.39
PDAP1-202ENST00000426447 PEX5LQ8IYB4 626 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 GSPT2Q8IYD1 628 aaKnown RBP12.59□□□□□ -0.39
PDAP1-202ENST00000426447 KIF18AQ8NI77 898 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 NANPQ8TBE9 248 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 MGARPQ8TDB4 240 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 YIPF5Q969M3 257 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 PPP1R36Q96LQ0 422 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 PRDM4Q9UKN5 801 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 RCE1Q9Y256 329 aa12.59□□□□□ -0.39
PDAP1-202ENST00000426447 MGAM2Q2M2H8 2515 aa12.58□□□□□ -0.4
PDAP1-202ENST00000426447 A0A0G2JMP0 313 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms