RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 ZDBF2Q9HCK1 2354 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 FITM1A5D6W6 292 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 IFI6P09912 130 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 TALDO1P37837 337 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 SRP9P49458 86 aaKnown RBP10.53□□□□□ -0.72
UBR4-207ENST00000425413 AFF3P51826 1226 aaKnown RBP10.53□□□□□ -0.72
UBR4-207ENST00000425413 NRG3P56975 720 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 RPL18Q07020 188 aaKnown RBP10.53□□□□□ -0.72
UBR4-207ENST00000425413 FAM69BQ5VUD6 431 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 TMPRSS9Q7Z410 1059 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 ZNF578Q96N58 590 aaPredicted RBP10.53□□□□□ -0.72
UBR4-207ENST00000425413 UCK1Q9HA47 277 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 BRD7Q9NPI1 651 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 EPHA6Q9UF33 1036 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 KLHL21Q9UJP4 597 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 KLHDC2Q9Y2U9 406 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 MED12Q93074 2177 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 LYRM1O43325 122 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 IGKV3-11P04433 115 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 OR2T7P0C7T2 308 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 RAB3BP20337 219 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 CXCR1P25024 350 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 THBS2P35442 1172 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 SOX2P48431 317 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 CLDN12P56749 244 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 POU4F2Q12837 409 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 CDK5R1Q15078 307 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 EBPQ15125 230 aaKnown RBP10.53□□□□□ -0.72
UBR4-207ENST00000425413 COL13A1Q5TAT6 717 aaPredicted RBP10.53□□□□□ -0.72
UBR4-207ENST00000425413 FNDC7Q5VTL7 733 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 KANSL1Q7Z3B3 1105 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 OR7G1Q8NGA0 311 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 OR2T27Q8NH04 317 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 ADIPOR1Q96A54 375 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 FRMD6Q96NE9 622 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 TSPAN10Q9H1Z9 355 aaPredicted RBP10.53□□□□□ -0.72
UBR4-207ENST00000425413 RNF121Q9H920 327 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 HAO2Q9NYQ3 351 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 GRHPRQ9UBQ7 328 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 IKZF2Q9UKS7 526 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 BLACEA4D250 179 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 H3BMH7 237 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 ARHGEF9O43307 516 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 TFPIP10646 304 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 ATF1P18846 271 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 TAS2R43P59537 309 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 ELAVL1Q15717 326 aaKnown RBP10.52□□□□□ -0.73
UBR4-207ENST00000425413 KDM8Q8N371 416 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 CCDC74AQ96AQ1 378 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 DERL3Q96Q80 235 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 PELOQ9BRX2 385 aaKnown RBP10.52□□□□□ -0.73
UBR4-207ENST00000425413 OR2B2Q9GZK3 357 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 OR11A1Q9GZK7 315 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 SYT4Q9H2B2 425 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 ADAM30Q9UKF2 790 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 IGKV3D-11A0A0A0MRZ8 115 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 A0A0G2JK05 382 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 FAM47E-STBD1D6RA91 191 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 HIST1H2ABP04908 130 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 CD14P08571 375 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 CD3GP09693 182 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 PNMTP11086 282 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 DHPSP49366 369 aaPredicted RBP10.52□□□□□ -0.73
UBR4-207ENST00000425413 NANOS3P60323 173 aaKnown RBP10.52□□□□□ -0.73
UBR4-207ENST00000425413 PRPS1P60891 318 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 HES5Q5TA89 166 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 Q7L0L9 218 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 HIST3H2AQ7L7L0 130 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 OR8K3Q8NH51 312 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 ZNF671Q8TAW3 534 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 GCDHQ92947 438 aaPredicted RBP10.52□□□□□ -0.73
UBR4-207ENST00000425413 HIST1H2ACQ93077 130 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 HLA-CQ95604 372 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 SMIM19Q96E16 107 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 OMA1Q96E52 524 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 ABHD1Q96SE0 405 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 SOSTQ9BQB4 213 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 TMEM246Q9BRR3 403 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 TMEM43Q9BTV4 400 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 NOX4Q9NPH5 578 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 RXFP3Q9NSD7 469 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 COPS7AQ9UBW8 275 aa10.52□□□□□ -0.73
UBR4-207ENST00000425413 PCNX3Q9H6A9 2034 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 FRG2CA6NGY1 282 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 HMX3A6NHT5 357 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 RAD1O60671 282 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 HLA-DQA2P01906 255 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 PRKAR1AP10644 381 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 ABCD3P28288 659 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 RPS4XP62701 263 aaKnown RBP10.51□□□□□ -0.73
UBR4-207ENST00000425413 TATDN3Q17R31 274 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 SERPINA12Q8IW75 414 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 ZNF440Q8IYI8 595 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 RDH10Q8IZV5 341 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 POMGNT2Q8NAT1 580 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 SLC38A9Q8NBW4 561 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 FAM71CQ8NEG0 241 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 OR6N2Q8NGY6 317 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 OR14A16Q8NHC5 309 aa10.51□□□□□ -0.73
UBR4-207ENST00000425413 DUSP19Q8WTR2 217 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms