RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 RBMS1P29558 406 aaKnown RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 GBX2P52951 348 aaPredicted RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 GNG2P59768 71 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 RIN1Q13671 783 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 EFR3AQ14156 821 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 PON3Q15166 354 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 TRAM1Q15629 374 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 STK11Q15831 433 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 CCDC157Q569K6 752 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 BCL2L15Q5TBC7 163 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 SLC35F2Q8IXU6 374 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 OR4D9Q8NGE8 314 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 ZNRF4Q8WWF5 429 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 KCTD12Q96CX2 325 aaKnown RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 RASD2Q96D21 266 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 ORAI1Q96D31 301 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 PELI1Q96FA3 418 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 OR14A2Q96R54 314 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 LMF1Q96S06 567 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 MARVELD1Q9BSK0 173 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 ZNF426Q9BUY5 554 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 RPRD1BQ9NQG5 326 aaKnown RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 ACOXLQ9NUZ1 547 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 ING3Q9NXR8 418 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 CHRNA9Q9UGM1 479 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 ST6GALNAC2Q9UJ37 374 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 MRPS33Q9Y291 106 aaKnown RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 AK6Q9Y3D8 172 aaKnown RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 LILRA5A6NI73 299 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 C4orf47A7E2U8 309 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 GMFGO60234 142 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 SLC43A1O75387 559 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 EDNRAP25101 427 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 SNRPD2P62316 118 aaKnown RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 POU4F2Q12837 409 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 MRPL28Q13084 256 aaKnown RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 TPRA1Q86W33 373 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 C17orf82Q86X59 251 aaPredicted RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 IZUMO1Q8IYV9 350 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 ELMOD2Q8IZ81 293 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 C16orf52Q8NHV5 167 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 ZNF671Q8TAW3 534 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 PHF21AQ96BD5 680 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 MMABQ96EY8 250 aaPredicted RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 ZDHHC12Q96GR4 267 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 ZC3H10Q96K80 434 aaKnown RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 TEKT2Q9UIF3 430 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 ASCC3Q8N3C0 2202 aaKnown RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 TNRC6BQ9UPQ9 1833 aaKnown RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 TRBV2A0A0J9YWF9 115 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 CLDN4O14493 209 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 DUX1O43812 170 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 PRAMEF2O60811 474 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 PRKACAP17612 351 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 ATF1P18846 271 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 CD53P19397 219 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 CSF2RBP32927 897 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 EVI2BP34910 448 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 RRAS2P62070 204 aaPredicted RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 CFHR1Q03591 330 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 FGFBP1Q14512 234 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 NTRK2Q16620 822 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 PRAMEF17Q5VTA0 474 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 PXKQ7Z7A4 578 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 MS4A15Q8N5U1 240 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 BCORP1Q8N888 145 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 SLC2A12Q8TD20 617 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 TRIM63Q969Q1 353 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 UBL7Q96S82 380 aaPredicted RBP9.75□□□□□ -0.85
CUX1-205ENST00000425244 NUDT15Q9NV35 164 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 HAO2Q9NYQ3 351 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 ATPIF1Q9UII2 106 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 KLHL21Q9UJP4 597 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 CACNG2Q9Y698 323 aa9.75□□□□□ -0.85
CUX1-205ENST00000425244 CACNA1CQ13936 2221 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 SERINC4A6NH21 518 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 IDSB3KWA1 339 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 B8ZZF3 427 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 BLOC1S5-TXNDC5H3BN57 136 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 FLRT2O43155 660 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 FOXS1O43638 330 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 CTNSO60931 367 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 SOX30O94993 753 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 MPLP40238 635 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 GPR143P51810 404 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 SIRPAP78324 504 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 LGALS3BPQ08380 585 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 FAPQ12884 760 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 CDK5R1Q15078 307 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 C4orf46Q504U0 113 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 GLRX5Q86SX6 157 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 TCTE3Q8IZS6 198 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 ZBTB44Q8NCP5 570 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 AKAP1Q92667 903 aaKnown RBP eCLIP9.74□□□□□ -0.851e-6■■■■□ 21.5
CUX1-205ENST00000425244 DACT3Q96B18 629 aaPredicted RBP9.74□□□□□ -0.85
CUX1-205ENST00000425244 CREB3L1Q96BA8 519 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 SMIM19Q96E16 107 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 DNAJA3Q96EY1 480 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 G6PC3Q9BUM1 346 aa9.74□□□□□ -0.85
CUX1-205ENST00000425244 OR10A5Q9H207 317 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms