RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 SSX8Q7RTT4 187 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 C10orf53Q8N6V4 93 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 SCAIQ8N9R8 606 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 MBD6Q96DN6 1003 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 MUCL1Q96DR8 90 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 SLC41A3Q96GZ6 507 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 MPP4Q96JB8 637 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 OXGR1Q96P68 337 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 MOGAT1Q96PD6 335 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 ASPNQ9BXN1 380 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 ALG2Q9H553 416 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 UBTD1Q9HAC8 227 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 NQO1P15559 274 aaKnown RBP23.24■■□□□ 1.31
CDK9-202ENST00000421939 GSK3BP49841 420 aa23.24■■□□□ 1.31
CDK9-202ENST00000421939 SELENOPP49908 381 aa23.24■■□□□ 1.31
CDK9-202ENST00000421939 LTBQ06643 244 aa23.24■■□□□ 1.31
CDK9-202ENST00000421939 NIPAL3Q6P499 406 aa23.24■■□□□ 1.31
CDK9-202ENST00000421939 DEF8Q6ZN54 512 aa23.24■■□□□ 1.31
CDK9-202ENST00000421939 ZNF704Q6ZNC4 412 aaPredicted RBP23.24■■□□□ 1.31
CDK9-202ENST00000421939 PIGWQ7Z7B1 504 aa23.24■■□□□ 1.31
CDK9-202ENST00000421939 FOXC2Q99958 501 aa23.24■■□□□ 1.31
CDK9-202ENST00000421939 TMEM204Q9BSN7 226 aa23.24■■□□□ 1.31
CDK9-202ENST00000421939 ABCD2Q9UBJ2 740 aa23.24■■□□□ 1.31
CDK9-202ENST00000421939 RCE1Q9Y256 329 aa23.24■■□□□ 1.31
CDK9-202ENST00000421939 ROS1P08922 2347 aa23.24■■□□□ 1.31
CDK9-202ENST00000421939 LRRN3E7EW58 273 aa23.23■■□□□ 1.31
CDK9-202ENST00000421939 MPGP29372 298 aa23.23■■□□□ 1.31
CDK9-202ENST00000421939 OR1E2P47887 323 aa23.23■■□□□ 1.31
CDK9-202ENST00000421939 PSME3P61289 254 aa23.23■■□□□ 1.31
CDK9-202ENST00000421939 IL1RL1Q01638 556 aa23.23■■□□□ 1.31
CDK9-202ENST00000421939 C1DQ13901 141 aaKnown RBP23.23■■□□□ 1.31
CDK9-202ENST00000421939 C9orf135Q5VTT2 229 aa23.23■■□□□ 1.31
CDK9-202ENST00000421939 OR7E24Q6IFN5 339 aa23.23■■□□□ 1.31
CDK9-202ENST00000421939 TTC33Q6PID6 262 aaPredicted RBP23.23■■□□□ 1.31
CDK9-202ENST00000421939 C1orf162Q8NEQ5 155 aaPredicted RBP23.23■■□□□ 1.31
CDK9-202ENST00000421939 TPD52L3Q96J77 140 aa23.23■■□□□ 1.31
CDK9-202ENST00000421939 ZNF426Q9BUY5 554 aa23.23■■□□□ 1.31
CDK9-202ENST00000421939 AMBRA1Q9C0C7 1298 aa23.23■■□□□ 1.31
CDK9-202ENST00000421939 POLR2J2Q9GZM3 115 aaKnown RBP23.23■■□□□ 1.31
CDK9-202ENST00000421939 POLR2J3Q9H1A7 115 aaKnown RBP23.23■■□□□ 1.31
CDK9-202ENST00000421939 ESRP2Q9H6T0 727 aaKnown RBP23.23■■□□□ 1.31
CDK9-202ENST00000421939 MRPL39Q9NYK5 338 aaKnown RBP23.23■■□□□ 1.31
CDK9-202ENST00000421939 LOC102725191A0A1B0GVB3 256 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 OR6C65A6NJZ3 312 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 CXCR6O00574 342 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 GSTA4O15217 222 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 SHOX2O60902 331 aaPredicted RBP23.22■■□□□ 1.31
CDK9-202ENST00000421939 KRT33AO76009 404 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 MT-ATP6P00846 226 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 CD53P19397 219 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 CLDN17P56750 224 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 TAS2R41P59536 307 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 TGFBR3Q03167 851 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 GABRA6Q16445 453 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 ABHD12BQ7Z5M8 362 aaPredicted RBP23.22■■□□□ 1.31
CDK9-202ENST00000421939 LZICQ8WZA0 190 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 ALKBH3Q96Q83 286 aaPredicted RBP23.22■■□□□ 1.31
CDK9-202ENST00000421939 KCTD14Q9BQ13 255 aaPredicted RBP23.22■■□□□ 1.31
CDK9-202ENST00000421939 SLC19A3Q9BZV2 496 aa23.22■■□□□ 1.31
CDK9-202ENST00000421939 TRAF3IP2O43734 574 aaPredicted RBP23.21■■□□□ 1.31
CDK9-202ENST00000421939 DCTN3O75935 186 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 OR5F1O95221 314 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 SELENOWP63302 87 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 PMS2P3Q13401 168 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 ACKR1Q16570 336 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 NCMAPQ5T1S8 102 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 SPNS3Q6ZMD2 512 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 C20orf204Q6ZNR8 217 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 UEVLDQ8IX04 471 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 C17orf78Q8N4C9 275 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 OR52N5Q8NH56 324 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 MUS81Q96NY9 551 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 LRRC37BQ96QE4 947 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 ALPK1Q96QP1 1244 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 PRSS27Q9BQR3 290 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 CXXC4Q9H2H0 198 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 SPAG4Q9NPE6 437 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 RNF115Q9Y4L5 304 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 F8P00451 2351 aa23.21■■□□□ 1.31
CDK9-202ENST00000421939 MAP1AP78559 2803 aaPredicted RBP23.21■■□□□ 1.31
CDK9-202ENST00000421939 RAI1Q7Z5J4 1906 aaPredicted RBP23.2■■□□□ 1.3
CDK9-202ENST00000421939 ZNF587BE7ETH6 402 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 MS4A18H0YCH9 400 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 KPNA4O00629 521 aaPredicted RBP23.2■■□□□ 1.3
CDK9-202ENST00000421939 AKAP8O43823 692 aaKnown RBP23.2■■□□□ 1.3
CDK9-202ENST00000421939 ZNF432O94892 652 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 HPRP00739 348 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 PLAUP00749 431 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 LGALS3BPQ08380 585 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 PUDPQ08623 228 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 ZNF74Q16587 644 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 DEFB113Q30KQ7 82 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 MS4A18Q3C1V0 323 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 LINC00470Q9BZP3 86 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 FKRPQ9H9S5 495 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 NPAP1Q9NZP6 1156 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 SLC25A15Q9Y619 301 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 HIVEP1P15822 2718 aa23.2■■□□□ 1.3
CDK9-202ENST00000421939 CD3EP07766 207 aa23.19■■□□□ 1.3
CDK9-202ENST00000421939 BSPH1Q075Z2 132 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms