RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 OR5J2Q8NH18 312 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 SGTBQ96EQ0 304 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 SEPHS2Q99611 448 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 NDUFAF4Q9P032 175 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 UPB1Q9UBR1 384 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 NDRG3Q9UGV2 375 aa13.97□□□□□ -0.17
BRAT1-202ENST00000421712 C11orf98E9PRG8 122 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 FFAR1O14842 300 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 CASKO14936 926 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 SERPINI2O75830 405 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 KRT33AO76009 404 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 H1F0P07305 194 aaKnown RBP13.96□□□□□ -0.17
BRAT1-202ENST00000421712 ADORA3P0DMS8 318 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 IGFBP2P18065 325 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 FUT1P19526 365 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 UGT2B10P36537 528 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 CLDN17P56750 224 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 VLDLRP98155 873 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 FGD3Q5JSP0 725 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 ANKRD34AQ69YU3 496 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 CXorf67Q86X51 503 aaPredicted RBP13.96□□□□□ -0.17
BRAT1-202ENST00000421712 UEVLDQ8IX04 471 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 LRRC17Q8N6Y2 441 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 SCAIQ8N9R8 606 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 ASB9Q96DX5 294 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF385AQ96PM9 386 aaKnown RBP13.96□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF426Q9BUY5 554 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 TRIM15Q9C019 465 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 FKRPQ9H9S5 495 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 NMNAT1Q9HAN9 279 aaPredicted RBP13.96□□□□□ -0.17
BRAT1-202ENST00000421712 MEPEQ9NQ76 525 aaPredicted RBP13.96□□□□□ -0.17
BRAT1-202ENST00000421712 MRPL39Q9NYK5 338 aaKnown RBP13.96□□□□□ -0.17
BRAT1-202ENST00000421712 CRIM1Q9NZV1 1036 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 HECTD1Q9ULT8 2610 aa13.96□□□□□ -0.17
BRAT1-202ENST00000421712 FREM1Q5H8C1 2179 aa13.96□□□□□ -0.18
BRAT1-202ENST00000421712 MS4A18H0YCH9 400 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 BLOC1S5-TXNDC5H3BN57 136 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 PLPP3O14495 311 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 FABP3P05413 133 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 IFI30P13284 250 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 IL32P24001 234 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 EDNRAP25101 427 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 NTF4P34130 210 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 PUDPQ08623 228 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 MS4A18Q3C1V0 323 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 LCN8Q6JVE9 175 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 NIPAL3Q6P499 406 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 ZDHHC21Q8IVQ6 265 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 CDK20Q8IZL9 346 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 ZIC4Q8N9L1 334 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 ADPRHL1Q8NDY3 354 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 OR52J3Q8NH60 311 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 C7orf34Q96L11 122 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 PIP5K1AQ99755 562 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 MED18Q9BUE0 208 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 HDHD5Q9BXW7 423 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 C20orf141Q9NUB4 165 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 KCNN3Q9UGI6 736 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 ZNF229Q9UJW7 825 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 TESMINQ9Y4I5 508 aa13.95□□□□□ -0.18
BRAT1-202ENST00000421712 ADGRG4Q8IZF6 3080 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 SH3D21A4FU49 640 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 GSC2O15499 205 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 RNF13O43567 381 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 AKAP8O43823 692 aaKnown RBP13.94□□□□□ -0.18
BRAT1-202ENST00000421712 PIP5K1CO60331 668 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 OR7A10O76100 309 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 FUT4P22083 530 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 SMIM11AP58511 58 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 SPIBQ01892 262 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 CHRNB3Q05901 458 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 FAPQ12884 760 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 TRAP1Q12931 704 aaKnown RBP13.94□□□□□ -0.18
BRAT1-202ENST00000421712 POU4F3Q15319 338 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 TSC22D1Q15714 1073 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 FAM98BQ52LJ0 330 aaKnown RBP13.94□□□□□ -0.18
BRAT1-202ENST00000421712 FBXW9Q5XUX1 488 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 FBXW10Q5XX13 1052 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 ALKBH2Q6NS38 261 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 TBPL2Q6SJ96 375 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 STAC2Q6ZMT1 411 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 Q6ZT83 130 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 CCDC121Q6ZUS5 278 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 NANOGNBQ7Z5D8 188 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 TSEN54Q7Z6J9 526 aaKnown RBP13.94□□□□□ -0.18
BRAT1-202ENST00000421712 EPHX4Q8IUS5 362 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 GABRG1Q8N1C3 465 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 PIK3C3Q8NEB9 887 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 FAM222BQ8WU58 562 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 ACOT11Q8WXI4 607 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-202ENST00000421712 KISS1RQ969F8 398 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-202ENST00000421712 TMEM45BQ96B21 275 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 BPIFA2Q96DR5 249 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 ZC3HAV1LQ96H79 300 aaKnown RBP13.94□□□□□ -0.18
BRAT1-202ENST00000421712 MCCC2Q9HCC0 563 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 IL1RAPQ9NPH3 570 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 MAN2C1Q9NTJ4 1040 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 ASB6Q9NWX5 421 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 GPR52Q9Y2T5 361 aa13.94□□□□□ -0.18
BRAT1-202ENST00000421712 NOX1Q9Y5S8 564 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms