RNA–Protein interactions for RNA: ENST00000418900.6

HIGD1A-202, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIGD1A, Length 1,322 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-202ENST00000418900 DSPPQ9NZW4 1301 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 ARPC4-TTLL3A0A0A6YYG9 625 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 A0A0G2JPF8 293 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 HNRNPCL2B2RXH8 293 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 HNRNPCL3B7ZW38 293 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 HDAC3O15379 428 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 HNRNPCL1O60812 293 aaKnown RBP12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 NPIPB7O75200 414 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 CECR9P0C854 216 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 HNRNPCL4P0DMR1 293 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 ZNF43P17038 809 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 CALCRP30988 508 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 THBS2P35442 1172 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 RPS5P46782 204 aaKnown RBP12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 ARF1P84077 181 aaKnown RBP12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 HOXC5Q00444 222 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 ZSWIM7Q19AV6 140 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 GTDC1Q4AE62 458 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 ZNF311Q5JNZ3 666 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 CEP85LQ5SZL2 805 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 RNF220Q5VTB9 566 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 ZNF540Q8NDQ6 660 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 MFSD8Q8NHS3 518 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 MAGEE2Q8TD90 523 aaPredicted RBP12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 C19orf24Q9BVV8 132 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 LINC00470Q9BZP3 86 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 BPESC1Q9GZL8 116 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 NELFAQ9H3P2 528 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 PLK3Q9H4B4 646 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 ARMC7Q9H6L4 198 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 CACYBPQ9HB71 228 aaKnown RBP12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 MYOZ1Q9NP98 299 aaPredicted RBP12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 PLA2G2EQ9NZK7 142 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 IFT52Q9Y366 437 aa12.19□□□□□ -0.46
HIGD1A-202ENST00000418900 A0A096LPI6 279 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 SH3PXD2BA1X283 911 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 LRP5LA4QPB2 252 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 TMEM247A6NEH6 219 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 TRPC5OSA6NMA1 111 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 VSTM5A8MXK1 200 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 TMEM229AB2RXF0 380 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 PDE5AO76074 875 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 STAMBPO95630 424 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 CELA3BP08861 270 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 ZCCHC18P0CG32 403 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 PNMTP11086 282 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 ZNF23P17027 643 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 HNF1AP20823 631 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 GTF2E2P29084 291 aaKnown RBP12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 THBS4P35443 961 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 IDH3GP51553 393 aaPredicted RBP12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 HGFACQ04756 655 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 EFNB3Q15768 340 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 C3orf36Q3SXR2 165 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 PDCD4Q53EL6 469 aaKnown RBP12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 ZCCHC24Q8N2G6 241 aaKnown RBP12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 OR4F15Q8NGB8 312 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 KTI12Q96EK9 354 aaPredicted RBP12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 ITCHQ96J02 903 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 SOX7Q9BT81 388 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 PARD6BQ9BYG5 372 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 RMND5AQ9H871 391 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 THAP1Q9NVV9 213 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 SEC14L4Q9UDX3 406 aa12.18□□□□□ -0.46
HIGD1A-202ENST00000418900 FTCDNL1E5RQL4 147 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 hCG_2039718K7EN88 272 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 SLC43A1O75387 559 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 IGLV1-44P01699 117 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 IDO1P14902 403 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 CBR1P16152 277 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 PPOXP50336 477 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 WDR4P57081 412 aaKnown RBP12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 EGR4Q05215 589 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 C1DQ13901 141 aaKnown RBP12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 SLC9B1Q4ZJI4 515 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 TNFAIP8L3Q5GJ75 292 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 SPATA21Q7Z572 469 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 MYPOPQ86VE0 399 aaPredicted RBP12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 MGARPQ8TDB4 240 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 VPS33AQ96AX1 596 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 OXGR1Q96P68 337 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 ZNF317Q96PQ6 595 aaPredicted RBP12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 DOK1Q99704 481 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 PTDSS2Q9BVG9 487 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 GPR35Q9HC97 309 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 RPS6KB2Q9UBS0 482 aa12.17□□□□□ -0.46
HIGD1A-202ENST00000418900 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.16□□□□□ -0.461e-8■■■■■ 32.3
HIGD1A-202ENST00000418900 RPL36A-HNRNPH2H7BZ11 118 aa12.16□□□□□ -0.46
HIGD1A-202ENST00000418900 ZNF432O94892 652 aa12.16□□□□□ -0.46
HIGD1A-202ENST00000418900 IGKV3-15P01624 115 aa12.16□□□□□ -0.46
HIGD1A-202ENST00000418900 DAOP14920 347 aa12.16□□□□□ -0.46
HIGD1A-202ENST00000418900 NPR2P20594 1047 aa12.16□□□□□ -0.46
HIGD1A-202ENST00000418900 CBLP22681 906 aa12.16□□□□□ -0.46
HIGD1A-202ENST00000418900 CAPZA2P47755 286 aa12.16□□□□□ -0.46
HIGD1A-202ENST00000418900 POLR2JP52435 117 aaKnown RBP12.16□□□□□ -0.46
HIGD1A-202ENST00000418900 SH3BGRP55822 239 aaPredicted RBP12.16□□□□□ -0.46
HIGD1A-202ENST00000418900 IL1RL1Q01638 556 aa12.16□□□□□ -0.46
HIGD1A-202ENST00000418900 NPRL3Q12980 569 aa12.16□□□□□ -0.46
HIGD1A-202ENST00000418900 CR1LQ2VPA4 569 aa12.16□□□□□ -0.46
HIGD1A-202ENST00000418900 C6orf10Q5SRN2 563 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms