RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ACOT1Q86TX2 421 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 FAM228AQ86W67 206 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 TMEM61Q8N0U2 210 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 CCDC148Q8NFR7 591 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 RAB3IL1Q8TBN0 382 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 TCTEX1D2Q8WW35 142 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 EMG1Q92979 244 aaKnown RBP2.55□□□□□ -2
HMGB1P49-201ENST00000418882 SENP8Q96LD8 212 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 RIT2Q99578 217 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 NPAS2Q99743 824 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 SLC17A9Q9BYT1 436 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 OR11A1Q9GZK7 315 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 FN3KRPQ9HA64 309 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 RPRD1BQ9NQG5 326 aaKnown RBP2.55□□□□□ -2
HMGB1P49-201ENST00000418882 STOX2Q9P2F5 926 aaPredicted RBP2.55□□□□□ -2
HMGB1P49-201ENST00000418882 PHF11Q9UIL8 331 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 PSME2Q9UL46 239 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 STAP1Q9ULZ2 295 aa2.55□□□□□ -2
HMGB1P49-201ENST00000418882 CHTOPQ9Y3Y2 248 aaKnown RBP2.55□□□□□ -2
HMGB1P49-201ENST00000418882 LRCOL1A6NCL2 159 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 A8MUI8 341 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 C11orf94C9JXX5 98 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 PPIAL4DF5H284 164 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 H0Y8G0 127 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 PES1O00541 588 aaKnown RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 ZNF208O43345 1280 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 CXCL13O43927 109 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 ICOSLGO75144 302 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 BCAS1O75363 584 aaPredicted RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 P04436 131 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 GIPP09681 153 aaPredicted RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 PABPC4LP0CB38 370 aaKnown RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 CRISP2P16562 243 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 SHMT2P34897 504 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 BTCP35070 178 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 CHI3L1P36222 383 aaPredicted RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 GRIA1P42261 906 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 PPT1P50897 306 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 SUCLG1P53597 346 aaKnown RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 TGM3Q08188 693 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 TMED1Q13445 227 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 EIF4EBP1Q13541 118 aaPredicted RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 PDK3Q15120 406 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 KCTD19Q17RG1 926 aaPredicted RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 SLC25A52Q3SY17 297 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 PRAMEF20Q5VT98 475 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 EFL1Q7Z2Z2 1120 aaKnown RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 PSTKQ8IV42 348 aaKnown RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 VSTM4Q8IW00 320 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 LRRC75A-AS1Q8N1F1 130 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 DHRSXQ8N5I4 330 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 ANKFN1Q8N957 763 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 NPBQ8NG41 125 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 OR10A7Q8NGE5 316 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 OR5D13Q8NGL4 314 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 OR9G1Q8NH87 305 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 FANK1Q8TC84 345 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 RAET1EQ8TD07 263 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 RLN3Q8WXF3 142 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 NDRG1Q92597 394 aaKnown RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 FGF11Q92914 225 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 PEX13Q92968 403 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 TPD52L3Q96J77 140 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 CHMP4BQ9H444 224 aaKnown RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 SMYD3Q9H7B4 428 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 ELOVL3Q9HB03 270 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 SLC17A5Q9NRA2 495 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 CCL28Q9NRJ3 127 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 ETNK2Q9NVF9 386 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 IL36GQ9NZH8 169 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 ZNF282Q9UDV7 671 aaPredicted RBP2.54□□□□□ -2
HMGB1P49-201ENST00000418882 TRAPPC4Q9Y296 219 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 PIKFYVEQ9Y2I7 2098 aa2.54□□□□□ -2
HMGB1P49-201ENST00000418882 PCM1Q15154 2024 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 IGLV4-69A0A075B6H9 119 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 A0A0U1RQS6 177 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 LINC00854A0A1B0GVQ3 168 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 METTL21EPA6NDL7 271 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 TRDCB7Z8K6 153 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 L7N2F9 121 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 ARPC3O15145 178 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 MBTPS2O43462 519 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 POLR2MP0CAP2 368 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 ICAM2P13598 275 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 NCK1P16333 377 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 MMP11P24347 488 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 TNNT2P45379 298 aaPredicted RBP2.53□□□□□ -2
HMGB1P49-201ENST00000418882 P2RY1P47900 373 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 CSNK1DP48730 415 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 KPNA2P52292 529 aaKnown RBP2.53□□□□□ -2
HMGB1P49-201ENST00000418882 CSTF1Q05048 431 aaKnown RBP2.53□□□□□ -2
HMGB1P49-201ENST00000418882 ZSCAN25Q6NSZ9 544 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 KCNIP4Q6PIL6 250 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 TMIGD1Q6UXZ0 262 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 SYT10Q6XYQ8 523 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 ZNF621Q6ZSS3 439 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 OFCC1Q8IZS5 231 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 TMEM123Q8N131 208 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 PDCL2Q8N4E4 241 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 CLDN19Q8N6F1 224 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms