RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 E2F3O00716 465 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 BET1O15155 118 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 POLR1CO15160 346 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 HCN1O60741 890 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 NOS1APO75052 506 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 ECI2O75521 394 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 KHDRBS3O75525 346 aaKnown RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 OR4F21O95013 312 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 SIX3O95343 332 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 LGI1O95970 557 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 GOT2P00505 430 aaKnown RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 SERPINA1P01009 418 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 SLC4A1P02730 911 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 C1QBP02746 253 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 C9P02748 559 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 MT-ND1P03886 318 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 SEMG1P04279 462 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ALPPP05187 535 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CDK1P06493 297 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CAPN1P07384 714 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 DBTP11182 482 aaKnown RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 ODC1P11926 461 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 PIPP12273 146 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 GP1BBP13224 206 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ANXA8P13928 327 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 TSPAN8P19075 237 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CYP2A7P20853 494 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CPN2P22792 545 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CFL1P23528 166 aaKnown RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 GADD45AP24522 165 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 LMO2P25791 158 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CD27P26842 260 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 FMO3P31513 532 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 IFNA8P32881 189 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 RPL9P32969 192 aaKnown RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 RCVRNP35243 200 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 GGT2P36268 569 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CD86P42081 329 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 PTGER3P43115 390 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 MAP2K4P45985 399 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 RGS6P49758 472 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 RGS4P49798 205 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 NPY4RP50391 375 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 DAPP51397 102 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 RORCP51449 518 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CLDN15P56746 228 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 MAP3K7CLP57077 242 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 YBEYP58557 167 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 CDC42P60953 191 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 LSM3P62310 102 aaKnown RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 RPP38P78345 283 aaKnown RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 CD300CQ08708 224 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 HSPA14Q0VDF9 509 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 NPRL3Q12980 569 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 BAMBIQ13145 260 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 TNK1Q13470 666 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ASAH1Q13510 395 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 EIF4EBP2Q13542 120 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 DGCR6Q14129 220 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ZNF235Q14590 738 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 TMEM187Q14656 261 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 KIAA0040Q15053 153 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 TAF1AQ15573 450 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 OR4D1Q15615 310 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 TSNQ15631 228 aaKnown RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 LRRC26Q2I0M4 334 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 GGTA1PQ4G0N0 100 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 GPAT3Q53EU6 434 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 HSD17B12Q53GQ0 312 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 YIF1BQ5BJH7 314 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ZNF789Q5FWF6 425 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 LYPLAL1Q5VWZ2 237 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 MEDAGQ5VYS4 303 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 RNLSQ5VYX0 342 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 NEK5Q6P3R8 708 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 FAHD1Q6P587 224 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 METAP1DQ6UB28 335 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 IL27RAQ6UWB1 636 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ENPP6Q6UWR7 440 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 HSDL2Q6YN16 418 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CERS6Q6ZMG9 384 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 TMPRSS11AQ6ZMR5 421 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 IDO2Q6ZQW0 420 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 Q6ZSR9 355 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 PAQR9Q6ZVX9 377 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 AHSA2Q719I0 299 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 RPS27LQ71UM5 84 aaKnown RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 EIF3MQ7L2H7 374 aaKnown RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 GDPD3Q7L5L3 318 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 DNAJB7Q7Z6W7 309 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 TAC4Q86UU9 113 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 SLC51BQ86UW2 128 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 RALGPS2Q86X27 583 aaPredicted RBP2.31□□□□□ -2.04
VPS41-206ENST00000418457 METTL23Q86XA0 190 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 SLC30A8Q8IWU4 369 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 TCAIMQ8N3R3 496 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 STX19Q8N4C7 294 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CLDN22Q8N7P3 220 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 GDPD1Q8N9F7 314 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 OR5AP2Q8NGF4 316 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms