RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 HNRNPCL2B2RXH8 293 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 HNRNPCL3B7ZW38 293 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 HNRNPCL1O60812 293 aaKnown RBP12.87□□□□□ -0.35
RPS28-201ENST00000417088 SNNO75324 88 aaPredicted RBP12.87□□□□□ -0.35
RPS28-201ENST00000417088 PDE5AO76074 875 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 AHSA1O95433 338 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 ANP32DO95626 131 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 HNRNPCL4P0DMR1 293 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 KITP10721 976 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 PNMTP11086 282 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 APEHP13798 732 aaKnown RBP12.87□□□□□ -0.35
RPS28-201ENST00000417088 HOXB1P14653 301 aaPredicted RBP12.87□□□□□ -0.35
RPS28-201ENST00000417088 IDO1P14902 403 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 HOXC5Q00444 222 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 ROR2Q01974 943 aaKnown RBP12.87□□□□□ -0.35
RPS28-201ENST00000417088 EGR4Q05215 589 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 EFNB3Q15768 340 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 ATG16L1Q676U5 607 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 NXNQ6DKJ4 435 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 VHLLQ6RSH7 139 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 IL17RELQ6ZVW7 336 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 FAM169BQ8N8A8 192 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 VPS33AQ96AX1 596 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 SLC25A36Q96CQ1 311 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 MAELQ96JY0 434 aaKnown RBP12.87□□□□□ -0.35
RPS28-201ENST00000417088 PLK3Q9H4B4 646 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 CHODLQ9H9P2 273 aa12.87□□□□□ -0.35
RPS28-201ENST00000417088 MYOZ1Q9NP98 299 aaPredicted RBP12.87□□□□□ -0.35
RPS28-201ENST00000417088 ZNF432O94892 652 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 IGKV3-15P01624 115 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 SRD5A1P18405 259 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 RPS5P46782 204 aaKnown RBP12.86□□□□□ -0.35
RPS28-201ENST00000417088 CLDN17P56750 224 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 ARF1P84077 181 aaKnown RBP12.86□□□□□ -0.35
RPS28-201ENST00000417088 HGFACQ04756 655 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 SLC9B1Q4ZJI4 515 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 ZNF311Q5JNZ3 666 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 FAM120AOSQ5T036 256 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 MSANTD1Q6ZTZ1 278 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 MYPOPQ86VE0 399 aaPredicted RBP12.86□□□□□ -0.35
RPS28-201ENST00000417088 KTI12Q96EK9 354 aaPredicted RBP12.86□□□□□ -0.35
RPS28-201ENST00000417088 ITCHQ96J02 903 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 BPESC1Q9GZL8 116 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 ARMC7Q9H6L4 198 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 RMND5AQ9H871 391 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 SDR39U1Q9NRG7 319 aaPredicted RBP12.86□□□□□ -0.35
RPS28-201ENST00000417088 THUMPD1Q9NXG2 353 aaKnown RBP12.86□□□□□ -0.35
RPS28-201ENST00000417088 ZIM2Q9NZV7 527 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 B3GAT1Q9P2W7 334 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 SEC14L4Q9UDX3 406 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 RCE1Q9Y256 329 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 IFT52Q9Y366 437 aa12.86□□□□□ -0.35
RPS28-201ENST00000417088 TMEM247A6NEH6 219 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 SLCO1B7G3V0H7 640 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 RPL36A-HNRNPH2H7BZ11 118 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 FZD7O75084 574 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 CELA3BP08861 270 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 NUDT7P0C024 238 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 CBR1P16152 277 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 ZNF23P17027 643 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 ZNF43P17038 809 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 PPOXP50336 477 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 SH3BGRP55822 239 aaPredicted RBP12.85□□□□□ -0.35
RPS28-201ENST00000417088 SRSF2Q01130 221 aaKnown RBP12.85□□□□□ -0.35
RPS28-201ENST00000417088 RGNQ15493 299 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 IQCCQ4KMZ1 466 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 MAVSQ7Z434 540 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 ZNF540Q8NDQ6 660 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 ANKK1Q8NFD2 765 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 NUP37Q8NFH4 326 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 OR4F15Q8NGB8 312 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 OR9I1Q8NGQ6 314 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 ZNF837Q96EG3 531 aaPredicted RBP12.85□□□□□ -0.35
RPS28-201ENST00000417088 OXGR1Q96P68 337 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 SOX7Q9BT81 388 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 RSPO3Q9BXY4 272 aaPredicted RBP12.85□□□□□ -0.35
RPS28-201ENST00000417088 CACYBPQ9HB71 228 aaKnown RBP12.85□□□□□ -0.35
RPS28-201ENST00000417088 MOV10Q9HCE1 1003 aaKnown RBP12.85□□□□□ -0.35
RPS28-201ENST00000417088 BCL2L10Q9HD36 194 aa12.85□□□□□ -0.35
RPS28-201ENST00000417088 TMEM120BA0PK00 339 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 ZNF503-AS2A6NEH8 195 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 SLC43A1O75387 559 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 STAMBPO95630 424 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 TGFAP01135 160 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 THBS4P35443 961 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 IDH3GP51553 393 aaPredicted RBP12.84□□□□□ -0.35
RPS28-201ENST00000417088 POLR2JP52435 117 aaKnown RBP12.84□□□□□ -0.35
RPS28-201ENST00000417088 C6orf10Q5SRN2 563 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 C6orf89Q6UWU4 347 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 MGARPQ8TDB4 240 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 GTF2H4Q92759 462 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 MAL2Q969L2 176 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 TAAR8Q969N4 342 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 SLC35B4Q969S0 331 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 OR52B2Q96RD2 323 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 DOK1Q99704 481 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 C19orf24Q9BVV8 132 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 PAIP1Q9H074 479 aaKnown RBP12.84□□□□□ -0.35
RPS28-201ENST00000417088 RAB1BQ9H0U4 201 aa12.84□□□□□ -0.35
RPS28-201ENST00000417088 ZNF442Q9H7R0 627 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms