RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TBC1D3FA6NER0 549 aaPredicted RBP18.75■□□□□ 0.59
AP1S3-205ENST00000415298 A6NLC8 198 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 PCGF2P35227 344 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 RPS25P62851 125 aaKnown RBP18.75■□□□□ 0.59
AP1S3-205ENST00000415298 FAM189A2Q15884 450 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 RAB12Q6IQ22 244 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 CERS6Q6ZMG9 384 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 CILP2Q8IUL8 1156 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 ADPRHL1Q8NDY3 354 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 EDAQ92838 391 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 CMTM7Q96FZ5 175 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 MRI1Q9BV20 369 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 SLC6A16Q9GZN6 736 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 ASB8Q9H765 288 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 OPN4Q9UHM6 478 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 YARS2Q9Y2Z4 477 aaKnown RBP18.75■□□□□ 0.59
AP1S3-205ENST00000415298 OCLNQ16625 522 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 NKAPLQ5M9Q1 402 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 ZNF551Q7Z340 670 aaPredicted RBP18.75■□□□□ 0.59
AP1S3-205ENST00000415298 PHYHIPQ92561 330 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 FBRSQ9HAH7 460 aa18.75■□□□□ 0.59
AP1S3-205ENST00000415298 SEC14L6B5MCN3 397 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 K7ESM1 405 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 M0R143 59 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 FMO6PO60774 539 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 CTNSO60931 367 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 SCN2BO60939 215 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 NCR1O76036 304 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 SOD1P00441 154 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 EBLN1P0CF75 366 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 WNT5AP41221 380 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 STAT5AP42229 794 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 SRSF3P84103 164 aaKnown RBP18.74■□□□□ 0.59
AP1S3-205ENST00000415298 SRSF11Q05519 484 aaKnown RBP18.74■□□□□ 0.59
AP1S3-205ENST00000415298 TMEM52BQ4KMG9 183 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 PTCHD4Q6ZW05 846 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 SZRD1Q7Z422 152 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 MSRB3Q8IXL7 192 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 FAM160A2Q8N612 972 aaPredicted RBP18.74■□□□□ 0.59
AP1S3-205ENST00000415298 TSTD1Q8NFU3 115 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 RIOK2Q9BVS4 552 aaKnown RBP18.74■□□□□ 0.59
AP1S3-205ENST00000415298 ALG9Q9H6U8 611 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 FKRPQ9H9S5 495 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 SLC25A37Q9NYZ2 338 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 IL17BQ9UHF5 180 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 TBC1D3DA0A087WVF3 549 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 TBC1D3IA0A087WXS9 549 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 TBC1D3EA0A087X179 549 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 TBC1D3KA0A087X1G2 549 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 TBC1D3LB9A6J9 549 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 SURF4O15260 269 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 TBC1D3HP0C7X1 549 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 SDHBP21912 280 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 SERPINF1P36955 418 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 MAGEB1P43366 347 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 GZMMP51124 257 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 HGFACQ04756 655 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 ISXQ2M1V0 245 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 C6orf136Q5SQH8 315 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 FBXW9Q5XUX1 488 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 TBC1D3GQ6DHY5 549 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 TBC1D3CQ6IPX1 549 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 NHLRC1Q6VVB1 395 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 SMIM15Q7Z3B0 74 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 FOXRED2Q8IWF2 684 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 TBC1D3Q8IZP1 549 aaPredicted RBP18.74■□□□□ 0.59
AP1S3-205ENST00000415298 C2CD4AQ8NCU7 369 aaPredicted RBP18.74■□□□□ 0.59
AP1S3-205ENST00000415298 RNASE8Q8TDE3 154 aaKnown RBP18.74■□□□□ 0.59
AP1S3-205ENST00000415298 CXorf40AQ8TE69 158 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 ARL11Q969Q4 196 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 SERHLQ9NQF3 203 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 C1GALT1Q9NS00 363 aa18.74■□□□□ 0.59
AP1S3-205ENST00000415298 SPIN1Q9Y657 262 aaPredicted RBP18.74■□□□□ 0.59
AP1S3-205ENST00000415298 PLRG1O43660 514 aaKnown RBP18.73■□□□□ 0.59
AP1S3-205ENST00000415298 TSPAN2O60636 221 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 ITGA10O75578 1167 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 SPARCP09486 303 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 LCP2Q13094 533 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 NFATC2Q13469 925 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 OAFQ86UD1 273 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 THNSL2Q86YJ6 484 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 OR1N1Q8NGS0 311 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 DUSP19Q8WTR2 217 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 GAL3ST3Q96A11 431 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 FAM131CQ96AQ9 280 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 FUZQ9BT04 418 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 RCC2Q9P258 522 aaKnown RBP18.73■□□□□ 0.59
AP1S3-205ENST00000415298 CYP8B1Q9UNU6 501 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 SF3B6Q9Y3B4 125 aaKnown RBP18.73■□□□□ 0.59
AP1S3-205ENST00000415298 SDK1Q7Z5N4 2213 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 A0A1W2PN81 502 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 WNT9AO14904 365 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 RDH16O75452 317 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 MT-ND4P03905 459 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 EPXP11678 715 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 CHRNA7P36544 502 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 SNTB2Q13425 540 aaKnown RBP18.73■□□□□ 0.59
AP1S3-205ENST00000415298 CHRFAM7AQ494W8 412 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 ADAM5Q6NVV9 412 aa18.73■□□□□ 0.59
AP1S3-205ENST00000415298 GLDNQ6ZMI3 551 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms