RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 EDN1P05305 212 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 CHRNGP07510 517 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 FRMD6-AS1P0C7T7 363 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 SLC35E2BP0CK96 405 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 PCMT1P22061 227 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 CBLP22681 906 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 EEF1B2P24534 225 aaKnown RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 HLA-FP30511 346 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 MAT2AP31153 395 aaKnown RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR1D2P34982 312 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 DLSTP36957 453 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 OPRL1P41146 370 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 MATKP42679 507 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 MAGEB1P43366 347 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ERFP50548 548 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 SLC7A2P52569 658 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 PLA2G16P53816 162 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 GNG2P59768 71 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 COPZ1P61923 177 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 RPS18P62269 152 aaKnown RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 RPS6P62753 249 aaKnown RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 SKP1P63208 163 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 FUT7Q11130 342 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 MAPK11Q15759 364 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 CYP51A1Q16850 503 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 SLC25A52Q3SY17 297 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 AGKQ53H12 422 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 CDKL4Q5MAI5 379 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 MLIPQ5VWP3 458 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 NCBP2-AS2Q69YL0 99 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 TIGD3Q6B0B8 471 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF544Q6NX49 715 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 FAAP20Q6NZ36 180 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 PNCKQ6P2M8 343 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 LINGO4Q6UY18 593 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 PAQR9Q6ZVX9 377 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 HDDC2Q7Z4H3 204 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 MYPOPQ86VE0 399 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 HORMAD1Q86X24 394 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 STX12Q86Y82 276 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 HIPK1Q86Z02 1210 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 RIMKLAQ8IXN7 391 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 LRRC52Q8N7C0 313 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 MAPK1IP1LQ8NDC0 245 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF680Q8NEM1 530 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR8J3Q8NGG0 315 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR13J1Q8NGT2 312 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 RHEBL1Q8TAI7 183 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ENKURQ8TC29 256 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 DYNC2LI1Q8TCX1 351 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 CYGBQ8WWM9 190 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 PIK3R3Q92569 461 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 NSMAFQ92636 917 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 AP2M1Q96CW1 435 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 LRRC58Q96CX6 371 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF514Q96K75 400 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 PRRC1Q96M27 445 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 LINC00479Q96M42 142 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 DDOQ99489 341 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 NPAS2Q99743 824 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 APOL4Q9BPW4 351 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 CCDC32Q9BV29 185 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 FUNDC2Q9BWH2 189 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 PRRG3Q9BZD7 231 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 NDEL1Q9GZM8 345 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 NXF2Q9GZY0 626 aaKnown RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 RACGAP1Q9H0H5 632 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ING2Q9H160 280 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR52A5Q9H2C5 316 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 PPIL3Q9H2H8 161 aaKnown RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 DUSP21Q9H596 190 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 DOCK5Q9H7D0 1870 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ATP13A3Q9H7F0 1226 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ANKRA2Q9H9E1 313 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 PELI2Q9HAT8 420 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 FGF22Q9HCT0 170 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF302Q9NR11 478 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 PIGVQ9NUD9 493 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 AHSPQ9NZD4 102 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 CCDC59Q9P031 241 aaKnown RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 PISDQ9UG56 409 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 FBXO5Q9UKT4 447 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 SLC7A7Q9UM01 511 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 SNX7Q9UNH6 387 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 MGAT4BQ9UQ53 548 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 RUVBL2Q9Y230 463 aaKnown RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 MRPS33Q9Y291 106 aaKnown RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 TRAPPC4Q9Y296 219 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 NCKAP1Q9Y2A7 1128 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 TANC1Q9C0D5 1861 aa3.22□□□□□ -1.89
HMGB3P23-201ENST00000414981 A0A087X002 238 aa3.22□□□□□ -1.89
HMGB3P23-201ENST00000414981 A0A0J9YYE9 177 aa3.22□□□□□ -1.89
HMGB3P23-201ENST00000414981 A0A0U1RRA0 63 aa3.22□□□□□ -1.89
HMGB3P23-201ENST00000414981 FXYD1O00168 92 aa3.22□□□□□ -1.89
HMGB3P23-201ENST00000414981 NME4O00746 187 aa3.22□□□□□ -1.89
HMGB3P23-201ENST00000414981 EI24O14681 340 aa3.22□□□□□ -1.89
HMGB3P23-201ENST00000414981 FPGTO14772 594 aa3.22□□□□□ -1.89
HMGB3P23-201ENST00000414981 ARPC2O15144 300 aa3.22□□□□□ -1.89
HMGB3P23-201ENST00000414981 CTDSPLO15194 276 aa3.22□□□□□ -1.89
HMGB3P23-201ENST00000414981 RNF13O43567 381 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms