RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 SYT14P1Q58G82 188 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 ARTNQ5T4W7 220 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 NXNL2Q5VZ03 156 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 UTS2BQ765I0 119 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 ARHGAP22Q7Z5H3 698 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 DTX3Q8N9I9 347 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 TM4SF19Q96DZ7 209 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 LMF1Q96S06 567 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 OR51B6Q9H340 312 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 ELOVL3Q9HB03 270 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 CDH20Q9HBT6 801 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 PARPBPQ9NWS1 579 aa8.31□□□□□ -1.08
LIG4-202ENST00000405925 A6NLC8 198 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 SHISA8B8ZZ34 492 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 IGHV3-9P01782 118 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 CSN2P05814 226 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 AP3S2P59780 193 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 MALLQ13021 153 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 SSPNQ14714 243 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 CBLN3Q6UW01 205 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 PM20D2Q8IYS1 436 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 LRRC18Q8N456 261 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 PLPP5Q8NEB5 264 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 SPTSSAQ969W0 71 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 CPNE2Q96FN4 548 aaPredicted RBP8.3□□□□□ -1.08
LIG4-202ENST00000405925 GNRHR2Q96P88 292 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 SARGQ9BW04 601 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 NTN4Q9HB63 628 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 HINT3Q9NQE9 182 aaKnown RBP8.3□□□□□ -1.08
LIG4-202ENST00000405925 BABAM2Q9NXR7 383 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 LUZP4Q9P127 313 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 A4GNTQ9UNA3 340 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 TCF20Q9UGU0 1960 aaKnown RBP8.3□□□□□ -1.08
LIG4-202ENST00000405925 OR6C70A6NIJ9 312 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 ZNF593O00488 134 aaPredicted RBP8.3□□□□□ -1.08
LIG4-202ENST00000405925 GPR171O14626 319 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 DHFRP00374 187 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 SLC2A2P11168 524 aaPredicted RBP8.3□□□□□ -1.08
LIG4-202ENST00000405925 ADH7P40394 386 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 MAGEA2P43356 314 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 PCBP3P57721 371 aaKnown RBP8.3□□□□□ -1.08
LIG4-202ENST00000405925 ISL1P61371 349 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 RBPJQ06330 500 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 SLC10A1Q14973 349 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 CARTPTQ16568 116 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 ZNF321PQ8N8H1 164 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 LRRC46Q96FV0 321 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 VSTM2LQ96N03 204 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 PSORS1C1Q9UIG5 152 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 TMEM269A0A1B0GVZ9 245 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 GGT3PA6NGU5 568 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 FTCDNL1E5RQL4 147 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 CXCL13O43927 109 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 MRPS14O60783 128 aaKnown RBP8.3□□□□□ -1.08
LIG4-202ENST00000405925 DNAJC13O75165 2243 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 PTHP01270 115 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 C1QCP02747 245 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 SERPINA7P05543 415 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 TFAP2AP05549 437 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 TBXA2RP21731 343 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 LCN1P31025 176 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 OR3A3P47888 321 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 OR3A2P47893 321 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 NFATC3Q12968 1075 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 ACKR1Q16570 336 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 B3GNTL1Q67FW5 361 aaPredicted RBP8.3□□□□□ -1.08
LIG4-202ENST00000405925 TIGD4Q8IY51 512 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 GPR148Q8TDV2 347 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 NPRL2Q8WTW4 380 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 SLC30A2Q9BRI3 323 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 SPATA2Q9UM82 520 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 SLC7A11Q9UPY5 501 aa8.3□□□□□ -1.08
LIG4-202ENST00000405925 EXO1Q9UQ84 846 aaKnown RBP8.3□□□□□ -1.08
LIG4-202ENST00000405925 TCRBV16S1A1N1A0A5B0 115 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 C4orf51C9J302 202 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 TSC22D2O75157 780 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 SLC2A10O95528 541 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 PPIAP62937 165 aaKnown RBP8.29□□□□□ -1.08
LIG4-202ENST00000405925 RPL18Q07020 188 aaKnown RBP8.29□□□□□ -1.08
LIG4-202ENST00000405925 LIN54Q6MZP7 749 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 SLC16A14Q7RTX9 510 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 ABHD12BQ7Z5M8 362 aaPredicted RBP8.29□□□□□ -1.08
LIG4-202ENST00000405925 LINC00346Q8IVM7 164 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 FTMTQ8N4E7 242 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 RAB33BQ9H082 229 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 MMP27Q9H306 513 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 EIF3KQ9UBQ5 218 aaKnown RBP8.29□□□□□ -1.08
LIG4-202ENST00000405925 EXTL2Q9UBQ6 330 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 CES1P1Q9UKY3 287 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 PCDHGB2Q9Y5G2 931 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 MN1Q10571 1320 aaPredicted RBP8.29□□□□□ -1.08
LIG4-202ENST00000405925 TNFRSF10AO00220 468 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 BCAS1O75363 584 aaPredicted RBP8.29□□□□□ -1.08
LIG4-202ENST00000405925 ZNF432O94892 652 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 FTH1P19P0C7X4 201 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 RGS6P49758 472 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 ENTPD1P49961 510 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 PITPNAQ00169 270 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 ZNF117Q03924 483 aa8.29□□□□□ -1.08
LIG4-202ENST00000405925 AIMP2Q13155 320 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms