RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 IGF2P01344 180 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 MT-ND1P03886 318 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 THY1P04216 161 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 TMIGD3P0DMS9 266 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-204ENST00000405578 IMPDH2P12268 514 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 FCGR1AP12314 374 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 RRM2P31350 389 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 OPRM1P35372 400 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 ARHGDIAP52565 204 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 ACTR3P61158 418 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 EGR4Q05215 589 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 TFF3Q07654 80 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 TMEM201Q5SNT2 666 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 OTUD3Q5T2D3 398 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-204ENST00000405578 TMEM225Q6GV28 225 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 RTL6Q6ICC9 239 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 OR2T5Q6IEZ7 315 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 MBOAT2Q6ZWT7 520 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 TSPYL5Q86VY4 417 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-204ENST00000405578 P3H2Q8IVL5 708 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 NKAIN4Q8IVV8 208 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 LINC00471Q8N535 108 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 SCAIQ8N9R8 606 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 OR2T29Q8NH02 315 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 OR52J3Q8NH60 311 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 TMEM255BQ8WV15 326 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 ROBO4Q8WZ75 1007 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 TAAR8Q969N4 342 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 UTP4Q969X6 686 aaKnown RBP9.41□□□□□ -0.9
RPAIN-204ENST00000405578 SGTBQ96EQ0 304 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 DNAJA3Q96EY1 480 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 GMPPAQ96IJ6 420 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-204ENST00000405578 PRSS27Q9BQR3 290 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 SFXN3Q9BWM7 321 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 SRXN1Q9BYN0 137 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 UCK2Q9BZX2 261 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 NDEL1Q9GZM8 345 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 FKRPQ9H9S5 495 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 RNF122Q9H9V4 155 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 NANSQ9NR45 359 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 ZNF629Q9UEG4 869 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-204ENST00000405578 ZNF229Q9UJW7 825 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 RASD1Q9Y272 281 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 B3GALT5Q9Y2C3 310 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 EMC9Q9Y3B6 208 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 AP4S1Q9Y587 144 aa9.41□□□□□ -0.9
RPAIN-204ENST00000405578 TNFRSF11BO00300 401 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 DVL2O14641 736 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 CYTIPO60759 359 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 FKBP6O75344 327 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 DEAF1O75398 565 aaPredicted RBP9.4□□□□□ -0.9
RPAIN-204ENST00000405578 E2F6O75461 281 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 TOXO94900 526 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 AKR7A3O95154 331 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 TGM6O95932 706 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 CH25HO95992 272 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 CST1P01037 141 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 SAGP10523 405 aaPredicted RBP9.4□□□□□ -0.9
RPAIN-204ENST00000405578 IFI30P13284 250 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 DNASE1P24855 282 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 CTSSP25774 331 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 GRPRP30550 384 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 CHRNB4P30926 498 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 ERFP50548 548 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 IL1RL1Q01638 556 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 RASGEF1BQ0VAM2 473 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 PMS2P3Q13401 168 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 C1DQ13901 141 aaKnown RBP9.4□□□□□ -0.9
RPAIN-204ENST00000405578 PDK3Q15120 406 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 ZNF74Q16587 644 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 ZFP1Q6P2D0 407 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 CLEC9AQ6UXN8 241 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 WDR88Q6ZMY6 472 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 H1FNTQ75WM6 255 aaPredicted RBP9.4□□□□□ -0.9
RPAIN-204ENST00000405578 NANOGNBQ7Z5D8 188 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 NRMQ8IXM6 262 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 MARVELD2Q8N4S9 558 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 CNEP1R1Q8N9A8 125 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 C9orf106Q8NAJ2 232 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 PAPD5Q8NDF8 572 aaKnown RBP9.4□□□□□ -0.9
RPAIN-204ENST00000405578 ADPRHL1Q8NDY3 354 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 SLC7A13Q8TCU3 470 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 RNF128Q8TEB7 428 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 STMN2Q93045 179 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 INTS12Q96CB8 462 aaKnown RBP9.4□□□□□ -0.9
RPAIN-204ENST00000405578 BPIFA2Q96DR5 249 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 LRRC46Q96FV0 321 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 DHRS1Q96LJ7 313 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 ALPK1Q96QP1 1244 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 PTDSS2Q9BVG9 487 aa9.4□□□□□ -0.9
RPAIN-204ENST00000405578 SF3B5Q9BWJ5 86 aaKnown RBP9.4□□□□□ -0.9
RPAIN-204ENST00000405578 POLDIP3Q9BY77 421 aaKnown RBP9.4□□□□□ -0.9
RPAIN-204ENST00000405578 MRPL39Q9NYK5 338 aaKnown RBP9.4□□□□□ -0.9
RPAIN-204ENST00000405578 SAMHD1Q9Y3Z3 626 aaKnown RBP9.4□□□□□ -0.9
RPAIN-204ENST00000405578 TLN2Q9Y4G6 2542 aa9.39□□□□□ -0.91
RPAIN-204ENST00000405578 A0A087WUU8 490 aa9.39□□□□□ -0.91
RPAIN-204ENST00000405578 IGHV3-15A0A0B4J1V0 119 aa9.39□□□□□ -0.91
RPAIN-204ENST00000405578 TRBV4-1A0A0J9YWV2 114 aa9.39□□□□□ -0.91
RPAIN-204ENST00000405578 AQP7P3A6NL99 342 aa9.39□□□□□ -0.91
RPAIN-204ENST00000405578 EFCAB9A8MZ26 197 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms