RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ZNF546Q86UE3 836 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 THOC6Q86W42 341 aaKnown RBP2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 TGIF2LXQ8IUE1 241 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 EGFL6Q8IUX8 553 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 PIANPQ8IYJ0 282 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 PNKDQ8N490 385 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 NECAB1Q8N987 351 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 OR56B2PQ8NGI1 322 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 FRAT1Q92837 279 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 ITCHQ96J02 903 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 KCNA7Q96RP8 456 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 P2RY13Q9BPV8 354 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 SLC39A3Q9BRY0 314 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 GPR61Q9BZJ8 451 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 TM9SF3Q9HD45 589 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 KLHL28Q9NXS3 571 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 KCNIP1Q9NZI2 227 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 MTRF1LQ9UGC7 380 aaKnown RBP2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 AGRNO00468 2067 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 NOTCH3Q9UM47 2321 aa2.71□□□□□ -1.98
HMGB1P17-201ENST00000403495 A0A1B0GVY2 172 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 FAM240BA0A1B0GVZ2 78 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 PSMB11A5LHX3 300 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 OR2AG2A6NM03 316 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 ZNF716A6NP11 495 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 TMEM110-MUSTN1A8MSY1 372 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 H0Y8G0 127 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 SGK1O00141 431 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 HCRTR1O43613 425 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 ERLIN1O75477 346 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 UPK3AO75631 287 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 CST1P01037 141 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 GIPP09681 153 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 ZNF735P0CB33 412 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 SLC2A3P11169 496 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 ABOP16442 354 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 IL12AP29459 219 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 FMO3P31513 532 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 KRTAP10-5P60370 271 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 UNC119Q13432 240 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 ZNF77Q15935 545 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 IL17AQ16552 155 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 KRT71Q3SY84 523 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 HSP90AB3PQ58FF7 597 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 RNASEKQ6P5S7 137 aaKnown RBP2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 NIPA1Q7RTP0 329 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 NANOGNBQ7Z5D8 188 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 PAQR7Q86WK9 346 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 TMEM61Q8N0U2 210 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 NKAPP1Q8N9T2 125 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 OR10G3Q8NGC4 313 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 KCNG3Q8TAE7 436 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 NEIL3Q8TAT5 605 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 TMEM101Q96IK0 257 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 HES7Q9BYE0 225 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 SELENOIQ9C0D9 397 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 LY9Q9HBG7 655 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 NT5MQ9NPB1 228 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 GIN1Q9NXP7 522 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 QPCTLQ9NXS2 382 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 ASF1AQ9Y294 204 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 ZNF256Q9Y2P7 627 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 CSDC2Q9Y534 153 aaKnown RBP2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 PEX16Q9Y5Y5 336 aa2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.7□□□□□ -1.98
HMGB1P17-201ENST00000403495 CTAGE15A4D2H0 777 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 A8MUA0 341 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 GOSR2O14653 212 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 PPP1R2P9O14990 202 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 AGPAT2O15120 278 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 PSTPIP1O43586 416 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 KLHL41O60662 606 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 NPIPB7O75200 414 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 CIB2O75838 187 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 KLF8O95600 359 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 TMEM50AO95807 157 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 MOSP00540 346 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 HPNP05981 417 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 KRTAP1-4P0C5Y4 121 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 SFTPCP11686 197 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 SLC2A5P22732 501 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 GABRR1P24046 479 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 EPS15P42566 896 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 GYG1P46976 350 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 SUCLG1P53597 346 aaKnown RBP2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 TAS2R19P59542 299 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 PLP1P60201 277 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 LYZP61626 148 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 TIMM10P62072 90 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 CCNA1P78396 465 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 ATP6AP1Q15904 470 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 CCDC14Q49A88 953 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 C11orf71Q6IPW1 123 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 RNF165Q6ZSG1 346 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 RUFY3Q7L099 469 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 GDPD3Q7L5L3 318 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 CTAGE6Q86UF2 777 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 CDR2LQ86X02 465 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 DCAF4L2Q8NA75 395 aa2.69□□□□□ -1.98
HMGB1P17-201ENST00000403495 FNDC5Q8NAU1 212 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms