RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 NR1H2P55055 460 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 PCBP3P57721 371 aaKnown RBP5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 IRX1P78414 480 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 NKX6-1P78426 367 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC25A3Q00325 362 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 BSPH1Q075Z2 132 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 SPOCK1Q08629 439 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 KLF10Q13118 480 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR1Q1Q15612 314 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 NPTX1Q15818 432 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 DUSP7Q16829 419 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZSWIM7Q19AV6 140 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 TRMT5Q32P41 509 aaKnown RBP5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 HSP90B2PQ58FF3 399 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 Q5PR19 223 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 METTL21CQ5VZV1 264 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 REP15Q6BDI9 236 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 TMEM225Q6GV28 225 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 NANOGP8Q6NSW7 305 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 ADAM5Q6NVV9 412 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 Q6ZS46 218 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 AAED1Q7RTV5 226 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 SNX32Q86XE0 403 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 RBM45Q8IUH3 476 aaKnown RBP5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 EPHX4Q8IUS5 362 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 POU5F2Q8N7G0 328 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 C11orf65Q8NCR3 313 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 GPR32P1Q8NGA4 272 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR4D11Q8NGI4 311 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR10A6Q8NH74 314 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 VANGL1Q8TAA9 524 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 TAAR8Q969N4 342 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC35B4Q969S0 331 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 TAMM41Q96BW9 452 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 ZNF607Q96SK3 696 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 SIKE1Q9BRV8 207 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 TMEM204Q9BSN7 226 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 SPATA5L1Q9BVQ7 753 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 TRIM2Q9C040 744 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 MRPL18Q9H0U6 180 aaKnown RBP5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR10A4Q9H209 315 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 GSX1Q9H4S2 264 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 KAT8Q9H7Z6 458 aaKnown RBP5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 NANOGQ9H9S0 305 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 BEX4Q9NWD9 120 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 ASB6Q9NWX5 421 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 ARMCX1Q9P291 453 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 UPB1Q9UBR1 384 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 MALT1Q9UDY8 824 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC13A4Q9UKG4 626 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 ANGPT4Q9Y264 503 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 SLC9A8Q9Y2E8 581 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 RNF115Q9Y4L5 304 aa5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 FN1P02751 2386 aaKnown RBP5.07□□□□□ -1.6
HMGB1P20-201ENST00000402555 A0A0B4J2E0 115 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 A0A1B0GX12 115 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 PRORSD1PA6NEY8 169 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 OR5H1A6NKK0 313 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 CPSF4LA6NMK7 179 aaKnown RBP5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 SHISA9B4DS77 424 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 LRRN3E7EW58 273 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 M0R1B8 84 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 PDLIM1O00151 329 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 UPK3AO75631 287 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 SERPINB7O75635 380 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 CNOT4O95628 575 aaKnown RBP5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 LGI1O95970 557 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 HPRP00739 348 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 GHRHP01286 108 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 SOD3P08294 240 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 TNFRSF1BP20333 461 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 CD247P20963 164 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 GTF2E2P29084 291 aaKnown RBP5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 GRPRP30550 384 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 MDH1P40925 334 aaKnown RBP5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 CRYBA2P53672 197 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 CDH12P55289 794 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 CLDN17P56750 224 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 NCALDP61601 193 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 TUBA1BP68363 451 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 TUBA4AP68366 448 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 IL1RL1Q01638 556 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 LTBQ06643 244 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 RBBP4Q09028 425 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 CYLC2Q14093 348 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 GABRA6Q16445 453 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 NRF1Q16656 503 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 MMEL1Q495T6 779 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 HIKESHIQ53FT3 197 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 ALG10BQ5I7T1 473 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 TIMM23BQ5SRD1 257 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 NIPAL3Q6P499 406 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 ULK3Q6PHR2 472 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 C6orf89Q6UWU4 347 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 WDR88Q6ZMY6 472 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 CREB3L2Q70SY1 520 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 TUBA1AQ71U36 451 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 LINGO2Q7L985 606 aa5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 NET1Q7Z628 596 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P20-201ENST00000402555 TSPYL5Q86VY4 417 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms