RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 SLC43A2Q8N370 569 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 OR5J2Q8NH18 312 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 OR51A7Q8NH64 312 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 PIGXQ8TBF5 258 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 ZHX1-C8orf76Q96EF9 292 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 CENPNQ96H22 339 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-204ENST00000401473 TNFRSF13CQ96RJ3 184 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 FEVQ99581 238 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 NAA11Q9BSU3 229 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-204ENST00000401473 ENKD1Q9H0I2 346 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 CHST11Q9NPF2 352 aa14.2□□□□□ -0.14
HMGA1-204ENST00000401473 PDP1Q9P0J1 537 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-204ENST00000401473 USP9YO00507 2555 aaPredicted RBP14.19□□□□□ -0.14
HMGA1-204ENST00000401473 TRAV27A0A087WT01 109 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 A0A0G2JNJ9 132 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 PTP4A3O75365 173 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 GTF2E2P29084 291 aaKnown RBP14.19□□□□□ -0.14
HMGA1-204ENST00000401473 ADORA2A-AS1P86434 159 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 PMS2P3Q13401 168 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 GUSBP1Q15486 140 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 OAFQ86UD1 273 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 GPAT4Q86UL3 456 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 TUSC5Q8IXB3 177 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 SCAIQ8N9R8 606 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 AQP11Q8NBQ7 271 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 OR13C2Q8NGS9 318 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 GIPC3Q8TF64 312 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 STMN2Q93045 179 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 CCDC120Q96HB5 630 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 TM9SF2Q99805 663 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 NIPSNAP1Q9BPW8 284 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 ASPNQ9BXN1 380 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 C6orf203Q9P0P8 240 aaPredicted RBP14.19□□□□□ -0.14
HMGA1-204ENST00000401473 Q9UFV3 132 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 CACNA1CQ13936 2221 aa14.19□□□□□ -0.14
HMGA1-204ENST00000401473 A0A1B0GUH1 482 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 EFCAB9A8MZ26 197 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 IL2RAP01589 272 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 RNF224P0DH78 156 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 ADORA3P0DMS8 318 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 AQP2P41181 271 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 KIR2DL2P43627 348 aaPredicted RBP14.18□□□□□ -0.14
HMGA1-204ENST00000401473 GSSP48637 474 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 FXYD6P3P58550 94 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 RPS4XP62701 263 aaKnown RBP14.18□□□□□ -0.14
HMGA1-204ENST00000401473 SHQ1Q6PI26 577 aaKnown RBP14.18□□□□□ -0.14
HMGA1-204ENST00000401473 ZIC4Q8N9L1 334 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 OR10G2Q8NGC3 310 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 SIGLEC7Q9Y286 467 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 TNFSF13O75888 250 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 HIST1H2ABP04908 130 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 FCGR2AP12318 317 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 AHCYP23526 432 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 UQCRC1P31930 480 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 SLC16A1P53985 500 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 PER3P56645 1201 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 RPL18Q07020 188 aaKnown RBP14.18□□□□□ -0.14
HMGA1-204ENST00000401473 PUDPQ08623 228 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 GK3PQ14409 553 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 RNPS1Q15287 305 aaKnown RBP14.18□□□□□ -0.14
HMGA1-204ENST00000401473 GTF2IRD2BQ6EKJ0 949 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 TMEM211Q6ICI0 200 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 HIST3H2AQ7L7L0 130 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 GTF2IRD2Q86UP8 949 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 CCDC71Q8IV32 467 aaPredicted RBP14.18□□□□□ -0.14
HMGA1-204ENST00000401473 LIX1LQ8IVB5 337 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 LINC00471Q8N535 108 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 MOSPD2Q8NHP6 518 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 RND1Q92730 232 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 HIST1H2ACQ93077 130 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 GTPBP3Q969Y2 492 aaKnown RBP14.18□□□□□ -0.14
HMGA1-204ENST00000401473 NRBF2Q96F24 287 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 GMPPAQ96IJ6 420 aaPredicted RBP14.18□□□□□ -0.14
HMGA1-204ENST00000401473 ZNF385AQ96PM9 386 aaKnown RBP14.18□□□□□ -0.14
HMGA1-204ENST00000401473 BCO1Q9HAY6 547 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 FANCFQ9NPI8 374 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 KLHL9Q9P2J3 617 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 OAZ3Q9UMX2 235 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 SLC5A6Q9Y289 635 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 TMEM5Q9Y2B1 443 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 HIF3AQ9Y2N7 669 aa14.18□□□□□ -0.14
HMGA1-204ENST00000401473 IGKV3D-15A0A087WSY6 115 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 LOC102725191A0A1B0GVB3 256 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 CLEC18AA5D8T8 446 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 C11orf98E9PRG8 122 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 G3V2T6 193 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 VAMP5O95183 116 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 BAG2O95816 211 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 F13BP05160 661 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 YES1P07947 543 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 ZNF23P17027 643 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 FPR3P25089 353 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 EDNRAP25101 427 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 ZP4Q12836 540 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 ZBED5Q49AG3 693 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 RIPPLY2Q5TAB7 128 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 CLEC18BQ6UXF7 455 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 CREB3L2Q70SY1 520 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 EPHX4Q8IUS5 362 aa14.17□□□□□ -0.14
HMGA1-204ENST00000401473 WDFY1Q8IWB7 410 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms