RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 PEX5LQ8IYB4 626 aa8.55□□□□□ -1.04
NIFKP1-201ENST00000398317 C17orf78Q8N4C9 275 aa8.55□□□□□ -1.04
NIFKP1-201ENST00000398317 ARIH2OSQ8N7S6 290 aa8.55□□□□□ -1.04
NIFKP1-201ENST00000398317 TMEM158Q8WZ71 300 aa8.55□□□□□ -1.04
NIFKP1-201ENST00000398317 BEX2Q9BXY8 128 aa8.55□□□□□ -1.04
NIFKP1-201ENST00000398317 WDR55Q9H6Y2 383 aaPredicted RBP8.55□□□□□ -1.04
NIFKP1-201ENST00000398317 SSU72Q9NP77 194 aaKnown RBP8.55□□□□□ -1.04
NIFKP1-201ENST00000398317 SLC6A13Q9NSD5 602 aa8.55□□□□□ -1.04
NIFKP1-201ENST00000398317 ADPRHL2Q9NX46 363 aa8.55□□□□□ -1.04
NIFKP1-201ENST00000398317 CDC42EP3Q9UKI2 254 aa8.55□□□□□ -1.04
NIFKP1-201ENST00000398317 GPR45Q9Y5Y3 372 aa8.55□□□□□ -1.04
NIFKP1-201ENST00000398317 IGHV1-18A0A0C4DH31 117 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 CDHR4A6H8M9 788 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 AQP7P3A6NL99 342 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 NR5A2O00482 541 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 RFXANKO14593 260 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 KRT33AO76009 404 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 SNUPNO95149 360 aaKnown RBP8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 KRT75O95678 551 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 CSF3P09919 207 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 KITP10721 976 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 PRG2P13727 222 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 ETFAP13804 333 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 UQCRBP14927 111 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 USF1P22415 310 aaPredicted RBP8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 EPHA3P29320 983 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 SELENOPP49908 381 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 P2RY4P51582 365 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 TUBA1BP68363 451 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 TUBA4AP68366 448 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 SRSF2Q01130 221 aaKnown RBP8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 GGTLC2Q14390 218 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 CARTPTQ16568 116 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 GSTA3Q16772 222 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 TBRG1Q3YBR2 411 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 TMEM225Q6GV28 225 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 WDR93Q6P2C0 686 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 IL17RELQ6ZVW7 336 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 TUBA1AQ71U36 451 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 LINGO2Q7L985 606 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 SPATA19Q7Z5L4 167 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 ZNF440Q8IYI8 595 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 LRRC34Q8IZ02 419 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 CLIP4Q8N3C7 705 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 MREGQ8N565 214 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 ANKRD42Q8N9B4 389 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 POMGNT2Q8NAT1 580 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 OR1K1Q8NGR3 316 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 OR52P1PQ8NH57 321 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 PROX1Q92786 737 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 SORCS2Q96PQ0 1159 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 SLC38A2Q96QD8 506 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 ZBTB18Q99592 522 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 SF3B5Q9BWJ5 86 aaKnown RBP8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 TMEM45AQ9NWC5 275 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 P2RX2Q9UBL9 471 aa8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 ZNF443Q9Y2A4 671 aaPredicted RBP8.54□□□□□ -1.04
NIFKP1-201ENST00000398317 A8MVM7 634 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 ZNF587BE7ETH6 402 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 FRS3O43559 492 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 LMX1BO60663 402 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 UPK3AO75631 287 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 BCHEP06276 602 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 NCF2P19878 526 aaPredicted RBP8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 CRATP43155 626 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 PDLIM4P50479 330 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 MAP2K6P52564 334 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 MVDP53602 400 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 COPZ1P61923 177 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 TXNL4AP83876 142 aaKnown RBP8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 HOXC5Q00444 222 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 GTDC1Q4AE62 458 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 LIN52Q52LA3 116 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 CEP85LQ5SZL2 805 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 HHATQ5VTY9 493 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 C1orf140Q5VVS0 124 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 PRAMEF8Q5VWM4 474 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 PRAMEF7Q5VXH5 474 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 NXNQ6DKJ4 435 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 WBP2NLQ6ICG8 309 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 NIPAL3Q6P499 406 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 VHLLQ6RSH7 139 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 CREB3L2Q70SY1 520 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 ABHD12BQ7Z5M8 362 aaPredicted RBP8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 SERPINA11Q86U17 422 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 EPHX4Q8IUS5 362 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 KIRREL3Q8IZU9 778 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 KDM8Q8N371 416 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 ANKS4BQ8N8V4 417 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 SLC38A5Q8WUX1 472 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 C3orf49Q96BT1 292 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 FOXN4Q96NZ1 517 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 ALKBH3Q96Q83 286 aaPredicted RBP8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 VRK1Q99986 396 aaPredicted RBP8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 KCNS3Q9BQ31 491 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 TAPBPLQ9BX59 468 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 SHARPINQ9H0F6 387 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 CHODLQ9H9P2 273 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 SEC61A2Q9H9S3 476 aa8.53□□□□□ -1.04
NIFKP1-201ENST00000398317 TMEM160Q9NX00 188 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms