RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 A0A1W2PQD3 144 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 OR6C65A6NJZ3 312 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 KDM4EB2RXH2 506 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF587BE7ETH6 402 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 H3BSH0 61 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 KDM4BO94953 1096 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 LCATP04180 440 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 ITGB2P05107 769 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 MAGEA2P43356 314 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF658BQ4V348 819 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-204ENST00000397606 BICRALQ6AI39 1079 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 POGLUT1Q8NBL1 392 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 RADILQ96JH8 1075 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 LRFN3Q9BTN0 628 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 SYT4Q9H2B2 425 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 DNAJB12Q9NXW2 375 aaKnown RBP7.54□□□□□ -1.2
PTPRD-204ENST00000397606 DOCK8Q8NF50 2099 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 A0A1W2PNR3 127 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 IFNA6P05013 189 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 FRKP42685 505 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-204ENST00000397606 SIRPAP78324 504 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 PITPNAQ00169 270 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 HSF1Q00613 529 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 TIGD3Q6B0B8 471 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 C16orf47Q6ZP98 133 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF454Q8N9F8 522 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 EXD3Q8N9H8 876 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 OR5AK2Q8NH90 309 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 NKD1Q969G9 470 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 APH1AQ96BI3 265 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 ARL5BQ96KC2 179 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 Q96M85 177 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 TMEM43Q9BTV4 400 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 NOTCH4Q99466 2003 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 SPTA1P02549 2419 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 A0A0B4J2E0 115 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 A0A1B0GX12 115 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 OR5H15A6NDH6 313 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 F5H5K5 113 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 FUT4P22083 530 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 CRHBPP24387 322 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 GADD45AP24522 165 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 S100GP29377 79 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 RFC3P40938 356 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 CLDN6P56747 220 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 AP3S2P59780 193 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 SQSTM1Q13501 440 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 SLC35D3Q5M8T2 416 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 HEPHL1Q6MZM0 1159 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 KRT74Q7RTS7 529 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 SLC37A3Q8NCC5 494 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 ZG16BQ96DA0 208 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 FBXO34Q9NWN3 711 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 FKBP7Q9Y680 259 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 TRABD2BA6NFA1 517 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 GGT3PA6NGU5 568 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 H7C1C5 153 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 CXCL13O43927 109 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 OR2T7P0C7T2 308 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 IFNGR1P15260 489 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 LCN6P62502 163 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 INSM1Q01101 510 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-204ENST00000397606 TP53I3Q53FA7 332 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 MAML2Q8IZL2 1156 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-204ENST00000397606 GPR32P1Q8NGA4 272 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 OR2T27Q8NH04 317 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 HOXB13Q92826 284 aaPredicted RBP7.54□□□□□ -1.2
PTPRD-204ENST00000397606 BORCS5Q969J3 196 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 C7orf34Q96L11 122 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 B3GNT4Q9C0J1 378 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 C1orf198Q9H425 327 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 NGBQ9NPG2 151 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 LANCL2Q9NS86 450 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 A4GNTQ9UNA3 340 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 STUB1Q9UNE7 303 aa7.54□□□□□ -1.2
PTPRD-204ENST00000397606 FABP12A6NFH5 140 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 HRKO00198 91 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 DNAJB6O75190 326 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 RGS9O75916 674 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF12P17014 697 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 CNR1P21554 472 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 HTR1FP30939 366 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 SNRPGP62308 76 aaKnown RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 GXYLT1Q4G148 440 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 C17orf82Q86X59 251 aaPredicted RBP7.53□□□□□ -1.2
PTPRD-204ENST00000397606 POC5Q8NA72 575 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 OR13C3Q8NGS6 347 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 MFSD8Q8NHS3 518 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 RHOXF1Q8NHV9 184 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 C1orf216Q8TAB5 229 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 CPT1CQ8TCG5 803 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF721Q8TF20 911 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 ARSGQ96EG1 525 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 TRGV5A0A0B4J1U4 118 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 PRAMEF27A3QJZ7 478 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 CLDN25C9JDP6 229 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 IL2RAP01589 272 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 SDHAP31040 664 aa7.53□□□□□ -1.2
PTPRD-204ENST00000397606 CLDN15P56746 228 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms