RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 C3orf49Q96BT1 292 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 WDFY2Q96P53 400 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 CDCP1Q9H5V8 836 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 LTBP2Q14767 1821 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 GPR179Q6PRD1 2367 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 LOC100509620A0A075B734 347 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 WNT1P04628 370 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 GP1BBP13224 206 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 CCKBRP32239 447 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 CDKN2AP42771 156 aaKnown RBP9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 FNTBP49356 437 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 ARRB1P49407 418 aaPredicted RBP9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 ARFIP1P53367 373 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 NRG3P56975 720 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 EFNB1P98172 346 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 MAB21L1Q13394 359 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 LANCL3Q6ZV70 420 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 CTRCQ99895 268 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 KLHDC3Q9BQ90 382 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 FKRPQ9H9S5 495 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 MRTO4Q9UKD2 239 aaKnown RBP9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 ITGB1BP2Q9UKP3 347 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 RCE1Q9Y256 329 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 KLF4O43474 513 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 SLC16A7O60669 478 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 FMO6PO60774 539 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 DCNP07585 359 aaKnown RBP9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 SSTR2P30874 369 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 ACTA2P62736 377 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 ACTG2P63267 376 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 CCINQ13939 588 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 C11orf88Q6PI97 169 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 LRFN4Q6PJG9 635 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 METAP1DQ6UB28 335 aaPredicted RBP9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 SDR16C5Q8N3Y7 309 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 SMRP1Q8NCR6 262 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 GPR119Q8TDV5 335 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 ACOT12Q8WYK0 555 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 NUDT22Q9BRQ3 303 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 FSCN3Q9NQT6 498 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 ZMIZ1Q9ULJ6 1067 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 FLVCR2Q9UPI3 526 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 PTPRSQ13332 1948 aa9.54□□□□□ -0.88
CPSF1P1-201ENST00000397477 C2orf16Q68DN1 1984 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 OR7A10O76100 309 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 OR2T7P0C7T2 308 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 HOXD11P31277 338 aaPredicted RBP9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 EVI2BP34910 448 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 MEP1BQ16820 701 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 TMEM69Q5SWH9 247 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 FAM69BQ5VUD6 431 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 LIPNQ5VXI9 398 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 WBP2NLQ6ICG8 309 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 OR7E24Q6IFN5 339 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 TSSK4Q6SA08 328 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 ARIH2OSQ8N7S6 290 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 OR2T27Q8NH04 317 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 OR5AK2Q8NH90 309 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 MED18Q9BUE0 208 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 TMEM138Q9NPI0 162 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 MRPS18AQ9NVS2 196 aaKnown RBP9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 EIF3KQ9UBQ5 218 aaKnown RBP9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 SERTAD3Q9UJW9 196 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 COL4A3Q01955 1670 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 SHISA8B8ZZ34 492 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 ITGA10O75578 1167 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 NSA2O95478 260 aaKnown RBP9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 HTR2BP41595 481 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 BLVRAP53004 296 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 POU4F2Q12837 409 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 TOMM20Q15388 145 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 KRT77Q7Z794 578 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 GPAT4Q86UL3 456 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 ZNF248Q8NDW4 579 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 SLC2A12Q8TD20 617 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 DEDD2Q8WXF8 326 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 KISS1RQ969F8 398 aaPredicted RBP9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 MESP1Q9BRJ9 268 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 SEMA4CQ9C0C4 833 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 COMMD4Q9H0A8 199 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 WDR76Q9H967 626 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 ISYNA1Q9NPH2 558 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 ING4Q9UNL4 249 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 BAIAP2Q9UQB8 552 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 TP53BP1Q12888 1972 aaPredicted RBP9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 PRR19A6NJB7 356 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 ZNF749O43361 778 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 HOXC4P09017 264 aaPredicted RBP9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 TACSTD2P09758 323 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 RPL18Q07020 188 aaKnown RBP9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 FGFBP1Q14512 234 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 DMRTC1Q5HYR2 192 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 TCTE1Q5JU00 501 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 YOD1Q5VVQ6 348 aaPredicted RBP9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 APOOLQ6UXV4 268 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 PIAS4Q8N2W9 510 aaPredicted RBP9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 PPP1R3EQ9H7J1 279 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 ZNF304Q9HCX3 659 aa9.53□□□□□ -0.88
CPSF1P1-201ENST00000397477 A0A087WUJ7 227 aa9.52□□□□□ -0.89
CPSF1P1-201ENST00000397477 NOTOA8MTQ0 251 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms