RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TMEM99Q8N816 258 aa19.02■□□□□ 0.63
CPNE1-204ENST00000397443 C9orf43Q8TAL5 461 aaPredicted RBP19.02■□□□□ 0.63
CPNE1-204ENST00000397443 MIB2Q96AX9 1013 aa19.02■□□□□ 0.63
CPNE1-204ENST00000397443 ERMAPQ96PL5 475 aaPredicted RBP19.02■□□□□ 0.63
CPNE1-204ENST00000397443 ZDHHC11Q9H8X9 412 aa19.02■□□□□ 0.63
CPNE1-204ENST00000397443 ZNF226Q9NYT6 803 aa19.02■□□□□ 0.63
CPNE1-204ENST00000397443 PLPP3O14495 311 aa19.01■□□□□ 0.63
CPNE1-204ENST00000397443 PRKYO43930 277 aa19.01■□□□□ 0.63
CPNE1-204ENST00000397443 DBPQ10586 325 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-204ENST00000397443 MFSD13AQ14CX5 517 aa19.01■□□□□ 0.63
CPNE1-204ENST00000397443 CMPK2Q5EBM0 449 aa19.01■□□□□ 0.63
CPNE1-204ENST00000397443 H1FNTQ75WM6 255 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-204ENST00000397443 BCDIN3DQ7Z5W3 292 aaKnown RBP19.01■□□□□ 0.63
CPNE1-204ENST00000397443 DEPDC4Q8N2C3 294 aa19.01■□□□□ 0.63
CPNE1-204ENST00000397443 GHDCQ8N2G8 530 aa19.01■□□□□ 0.63
CPNE1-204ENST00000397443 ABTB1Q969K4 478 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-204ENST00000397443 OTULINQ96BN8 352 aa19.01■□□□□ 0.63
CPNE1-204ENST00000397443 ACKR4Q9NPB9 350 aa19.01■□□□□ 0.63
CPNE1-204ENST00000397443 CHST11Q9NPF2 352 aa19.01■□□□□ 0.63
CPNE1-204ENST00000397443 MRPL39Q9NYK5 338 aaKnown RBP19.01■□□□□ 0.63
CPNE1-204ENST00000397443 CORINQ9Y5Q5 1042 aa19.01■□□□□ 0.63
CPNE1-204ENST00000397443 TRGV5A0A0B4J1U4 118 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 TMEM8BA6NDV4 472 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 ZNF814B7Z6K7 855 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 NPIPA5E9PKD4 350 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 ZNHIT1O43257 154 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 TLX2O43763 284 aaPredicted RBP19■□□□□ 0.63
CPNE1-204ENST00000397443 FMO3P31513 532 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 EIF1AXP47813 144 aaKnown RBP19■□□□□ 0.63
CPNE1-204ENST00000397443 MAD2L1BPQ15013 274 aaPredicted RBP19■□□□□ 0.63
CPNE1-204ENST00000397443 C3AR1Q16581 482 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 HBMQ6B0K9 141 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 C19orf48Q6RUI8 117 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 CCDC103Q8IW40 242 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 OR6S1Q8NH40 331 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 PLEKHA8Q96JA3 519 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 SLC38A2Q96QD8 506 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 TEX12Q9BXU0 123 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 NPIPA1Q9UND3 350 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 HLA-DOBP13765 273 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 PCYT1AP49585 367 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 LHX2P50458 406 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 CLDN15P56746 228 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 FOXK2Q01167 660 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 PUDPQ08623 228 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 SMN1Q16637 294 aaKnown RBP19■□□□□ 0.63
CPNE1-204ENST00000397443 UGT2A3Q6UWM9 527 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 DPY19L2P2Q6ZN68 376 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 GPAT4Q86UL3 456 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 LNX2Q8N448 690 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 NEIL3Q8TAT5 605 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 POLDIP3Q9BY77 421 aaKnown RBP19■□□□□ 0.63
CPNE1-204ENST00000397443 SRXN1Q9BYN0 137 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 PNPLA3Q9NST1 481 aa19■□□□□ 0.63
CPNE1-204ENST00000397443 PKD1L2Q7Z442 2459 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 CXCL13O43927 109 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 RAMP1O60894 148 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 PMS2P2O95744 297 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 CARD18P57730 90 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 SLC35A1P78382 337 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 CDK5R2Q13319 367 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 LRRC75AQ8NAA5 344 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 OR10D3Q8NH80 312 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 APH1BQ8WW43 257 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 RASD2Q96D21 266 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 UCN2Q96RP3 112 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 KLHL13Q9P2N7 655 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 ZMIZ1Q9ULJ6 1067 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 TRAPPC4Q9Y296 219 aa18.99■□□□□ 0.63
CPNE1-204ENST00000397443 MS4A18H0YCH9 400 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 SURF4O15260 269 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 RPS6KA3P51812 740 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 CSNK2A1P68400 391 aaPredicted RBP18.98■□□□□ 0.63
CPNE1-204ENST00000397443 MS4A18Q3C1V0 323 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 ESPNLQ6ZVH7 1005 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 KDF1Q8NAX2 398 aaPredicted RBP18.98■□□□□ 0.63
CPNE1-204ENST00000397443 OR4K13Q8NH42 304 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 OR2V1Q8NHB1 315 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 RHOXF1Q8NHV9 184 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 ZNF845Q96IR2 970 aaPredicted RBP18.98■□□□□ 0.63
CPNE1-204ENST00000397443 Q96M85 177 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 NRIP3Q9NQ35 241 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 INIPQ9NRY2 104 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 DNAJC27Q9NZQ0 273 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 SPRR3Q9UBC9 169 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 FAM183AA6NL82 134 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 LINC01387J3KSC0 135 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 CD14P08571 375 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 TSPAN19P0C672 248 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 HIST1H1CP16403 213 aaKnown RBP18.98■□□□□ 0.63
CPNE1-204ENST00000397443 NUDT6P53370 316 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 CLDN18P56856 261 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 HSF1Q00613 529 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 ANKDD1AQ495B1 522 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 TMEM225Q6GV28 225 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 PLXDC2Q6UX71 529 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 SCAIQ8N9R8 606 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 CYB561A3Q8NBI2 242 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 BPIFB6Q8NFQ5 453 aa18.98■□□□□ 0.63
CPNE1-204ENST00000397443 PRRG3Q9BZD7 231 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms