RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 PCDHAC1Q9H158 963 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 SLC7A10Q9NS82 523 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 ZNF701Q9NV72 531 aaPredicted RBP12.27□□□□□ -0.45
SEC13-204ENST00000397099 SLC25A15Q9Y619 301 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 ACANP16112 2415 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 NDUFAB1O14561 156 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 CLOCKO15516 846 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 CHP2O43745 196 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 IGHV3-9P01782 118 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 ITGA5P08648 1049 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 EDNRAP25101 427 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 NTF4P34130 210 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 PRPS1P60891 318 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 RPS4XP62701 263 aaKnown RBP12.26□□□□□ -0.45
SEC13-204ENST00000397099 C1DQ13901 141 aaKnown RBP12.26□□□□□ -0.45
SEC13-204ENST00000397099 DUSP7Q16829 419 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 Q5PR19 223 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 TSPO2Q5TGU0 170 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 SEZ6L2Q6UXD5 910 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.26□□□□□ -0.45
SEC13-204ENST00000397099 SNX32Q86XE0 403 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 SMYD1Q8NB12 490 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 RNF217Q8TC41 542 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 MAGEE2Q8TD90 523 aaPredicted RBP12.26□□□□□ -0.45
SEC13-204ENST00000397099 IGFBPL1Q8WX77 278 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 PROX1Q92786 737 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 TAAR8Q969N4 342 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 TRMT61AQ96FX7 289 aaKnown RBP12.26□□□□□ -0.45
SEC13-204ENST00000397099 PERPQ96FX8 193 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 POM121Q96HA1 1249 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 C18orf12Q96KH6 178 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 ZNF385AQ96PM9 386 aaKnown RBP12.26□□□□□ -0.45
SEC13-204ENST00000397099 MCHR1Q99705 422 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 SLC19A3Q9BZV2 496 aa12.26□□□□□ -0.45
SEC13-204ENST00000397099 HEATR1Q9H583 2144 aaKnown RBP12.25□□□□□ -0.45
SEC13-204ENST00000397099 CADP27708 2225 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 TRAPPC13A5PLN9 417 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 DPRXA6NFQ7 191 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 SLC43A1O75387 559 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 CD247P20963 164 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 GZMMP51124 257 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 SELPLGQ14242 412 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 C3orf36Q3SXR2 165 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 GLIPR1L2Q4G1C9 344 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 REP15Q6BDI9 236 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 CGB2Q6NT52 195 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 LINC00114Q6XXX2 140 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 BIVMQ86UB2 503 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 CALHM3Q86XJ0 350 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 EPHX4Q8IUS5 362 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 CCDC36Q8IYA8 594 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 PIK3C3Q8NEB9 887 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 SMAP2Q8WU79 429 aaPredicted RBP12.25□□□□□ -0.45
SEC13-204ENST00000397099 SLC41A3Q96GZ6 507 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 SMR3AQ99954 134 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 HOPXQ9BPY8 73 aaPredicted RBP12.25□□□□□ -0.45
SEC13-204ENST00000397099 BDH2Q9BUT1 245 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 ALG2Q9H553 416 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 FKRPQ9H9S5 495 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 SLC17A5Q9NRA2 495 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 MRPL39Q9NYK5 338 aaKnown RBP12.25□□□□□ -0.45
SEC13-204ENST00000397099 NOX1Q9Y5S8 564 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 PLCE1Q9P212 2302 aa12.25□□□□□ -0.45
SEC13-204ENST00000397099 LOC100653049A0A140TA62 436 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 HTR3EA5X5Y0 456 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 RPL36A-HNRNPH2H7BZ11 118 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 M0R082 166 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 FXYD1O00168 92 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 ABCD4O14678 606 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 KRT34O76011 436 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 PLAUP00749 431 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 INHBBP09529 407 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 BMP4P12644 408 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 NQO1P15559 274 aaKnown RBP12.24□□□□□ -0.45
SEC13-204ENST00000397099 CD40P25942 277 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 GRPRP30550 384 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 IFNA8P32881 189 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 PTH2RP49190 550 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 CDH12P55289 794 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 ENTPD8Q5MY95 495 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 HMBOX1Q6NT76 420 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 NIPAL3Q6P499 406 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 ANKRD16Q6P6B7 361 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 TTC33Q6PID6 262 aaPredicted RBP12.24□□□□□ -0.45
SEC13-204ENST00000397099 Q71RC1 249 aaPredicted RBP12.24□□□□□ -0.45
SEC13-204ENST00000397099 COMTD1Q86VU5 262 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 KRTAP1-3Q8IUG1 177 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 UEVLDQ8IX04 471 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 OR6T1Q8NGN1 323 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 OR52N5Q8NH56 324 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 ZNF417Q8TAU3 575 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 C10orf82Q8WW14 230 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 LRR1Q96L50 414 aa12.24□□□□□ -0.45
SEC13-204ENST00000397099 ZNF587Q96SQ5 575 aaPredicted RBP12.24□□□□□ -0.45
SEC13-204ENST00000397099 RSPO3Q9BXY4 272 aaPredicted RBP12.24□□□□□ -0.45
SEC13-204ENST00000397099 CISD1Q9NZ45 108 aaKnown RBP12.24□□□□□ -0.45
SEC13-204ENST00000397099 IGKV1D-42A0A075B6H8 117 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 FAM220BPB1ANY3 271 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 M0R3H8 397 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 TPST2O60704 377 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms