RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 IFNGP01579 166 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 CELA3AP09093 270 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 NUDT6P53370 316 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 SLC25A30Q5SVS4 291 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 BCDIN3DQ7Z5W3 292 aaKnown RBP18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 FAM109AQ8N4B1 249 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 MIB2Q96AX9 1013 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 KLHL15Q96M94 604 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 INIPQ9NRY2 104 aa18.35■□□□□ 0.53
VCPKMT-202ENST00000395860 URB1O60287 2271 aaKnown RBP18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 PTGES3LE9PB15 166 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 IDH3BO43837 385 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 ZNF3P17036 446 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 CDH15P55291 814 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 GFRA1P56159 465 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 GABARAPL2P60520 117 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 SLC35A1P78382 337 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 ZNF540Q8NDQ6 660 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 AMBNQ9NP70 447 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 PLCXD1Q9NUJ7 323 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 KLHL21Q9UJP4 597 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 B3GALT5Q9Y2C3 310 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 MED12Q93074 2177 aa18.34■□□□□ 0.53
VCPKMT-202ENST00000395860 ACACAQ13085 2346 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 TRIM64A6NGJ6 449 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 C1QTNF9BB2RNN3 333 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 FZD7O75084 574 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 C1QTNF9P0C862 333 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 APEHP13798 732 aaKnown RBP18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 POU3F2P20265 443 aaPredicted RBP18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 PUDPQ08623 228 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 ANKK1Q8NFD2 765 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 OR52E2Q8NGJ4 325 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 OR4K13Q8NH42 304 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 OTULINQ96BN8 352 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 SLC6A15Q9H2J7 730 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 FN3KQ9H479 309 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 GRHPRQ9UBQ7 328 aa18.33■□□□□ 0.53
VCPKMT-202ENST00000395860 A0A0J9YW62 118 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 MS4A18H0YCH9 400 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 TNFSF11O14788 317 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 SEC14L5O43304 696 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 SERPINI2O75830 405 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 PLGP00747 810 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 SMIM18P0DKX4 95 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 HIST1H1CP16403 213 aaKnown RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 SDHAP31040 664 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 CSNK2A1P68400 391 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 PMP22Q01453 160 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 ZP4Q12836 540 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 ZNF169Q14929 603 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 SLC10A1Q14973 349 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 TBR1Q16650 682 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 MS4A18Q3C1V0 323 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 CXXC5Q7LFL8 322 aaKnown RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 FAM122BQ7Z309 247 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 CPOQ8IVL8 374 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 TMEM99Q8N816 258 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 RASD2Q96D21 266 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 Q96M85 177 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 ZNF582Q96NG8 517 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 HINT3Q9NQE9 182 aaKnown RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 H2AFY2Q9P0M6 372 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 PCDHGB7Q9Y5F8 929 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 TEX13CA0A0J9YWL9 993 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 FAM183AA6NL82 134 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 SNTNA6NMZ2 147 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 PRR23D1E9PI22 279 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 IMPA2O14732 288 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 PRR23D2P0DMB1 279 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 ATP6V1B1P15313 513 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 STARP49675 285 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 CLDN20P56880 219 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 ZNF362Q5T0B9 420 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 PLBD1Q6P4A8 553 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 UBQLNLQ8IYU4 475 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 KDM8Q8N371 416 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 LSM14AQ8ND56 463 aaKnown RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 SDR9C7Q8NEX9 313 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 TSPAN32Q96QS1 320 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 RHNO1Q9BSD3 238 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 MRPS26Q9BYN8 205 aaKnown RBP18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 ACKR4Q9NPB9 350 aa18.32■□□□□ 0.52
VCPKMT-202ENST00000395860 A0A087WXM4 84 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 KDM4EB2RXH2 506 aaPredicted RBP18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 EIF1AYO14602 144 aaKnown RBP18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 PRODHO43272 600 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 PDGFAP04085 211 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 PAICSP22234 425 aaKnown RBP18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 CXADRP78310 365 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 SLC35A2P78381 396 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 ITGADQ13349 1161 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 CRMP1Q14194 572 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 NXNL2Q5VZ03 156 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 GPR139Q6DWJ6 353 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 UNQ6494/PRO21346Q6UXR6 183 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 ESPNLQ6ZVH7 1005 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 AHSA2Q719I0 299 aa18.31■□□□□ 0.52
VCPKMT-202ENST00000395860 GGNQ86UU5 652 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms