RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 ZNF346Q9UL40 294 aaKnown RBP9.69□□□□□ -0.86
PDGFD-202ENST00000393158 PKD1L2Q7Z442 2459 aa9.69□□□□□ -0.86
PDGFD-202ENST00000393158 HRNRQ86YZ3 2850 aaPredicted RBP9.69□□□□□ -0.86
PDGFD-202ENST00000393158 A8MVM7 634 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 ADRB1P08588 477 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 ZNF17P17021 662 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 IFNA8P32881 189 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 AQP2P41181 271 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 CDKN2AP42771 156 aaKnown RBP9.68□□□□□ -0.86
PDGFD-202ENST00000393158 LSAMPQ13449 338 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 ARMC4Q5T2S8 1044 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 SLC27A4Q6P1M0 643 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 TMEM163Q8TC26 289 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 FER1L6-AS2Q96M78 137 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 IL4I1Q96RQ9 567 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 TTTY12Q9BZ98 90 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 CMC2Q9NRP2 79 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 PCDHGB6Q9Y5F9 930 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 NBPF19A0A087WUL8 3843 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 TRAV36DV7A0A075B6V5 113 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 OR5H15A6NDH6 313 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 OR6C68A6NDL8 312 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 EFCAB9A8MZ26 197 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 SP1P08047 785 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 ENPP1P22413 925 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 ITGA3P26006 1051 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 CD79BP40259 229 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 NUDT6P53370 316 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 CLDN20P56880 219 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 RFLNBQ8N5W9 214 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 RELTQ969Z4 430 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 ZBTB8AQ96BR9 441 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 ZDHHC11Q9H8X9 412 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 ZMIZ1Q9ULJ6 1067 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 SPEF1Q9Y4P9 236 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 COMMD3-BMI1R4GMX3 469 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 CSMD2Q7Z408 3487 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 PRR32B1ATL7 298 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 CCRL2O00421 344 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 CDK2AP1O14519 115 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 ITPKBP27987 946 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 RFC3P40938 356 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 SLC9A3P48764 834 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 LHX2P50458 406 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 CCDC81Q6ZN84 652 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 SLC38A6Q8IZM9 456 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 TCEANCQ8N8B7 351 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 SGTBQ96EQ0 304 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 CITED4Q96RK1 184 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 MED20Q9H944 212 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 ERVK-18Q9QC07 812 aa9.68□□□□□ -0.86
PDGFD-202ENST00000393158 IGKV1D-43A0A0B4J1Z2 117 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 A0A1W2PNV4 684 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 FAM183AA6NL82 134 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 ELOA3DA6NLF2 546 aaPredicted RBP9.67□□□□□ -0.86
PDGFD-202ENST00000393158 TP53I11O14683 189 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 ARPC3O15145 178 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 TNFAIP8O95379 198 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 DBTP11182 482 aaKnown RBP9.67□□□□□ -0.86
PDGFD-202ENST00000393158 GABARAPL2P60520 117 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 SF3B4Q15427 424 aaKnown RBP eCLIP9.67□□□□□ -0.86
PDGFD-202ENST00000393158 ELOA3BQ3SY89 546 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 RBM48Q5RL73 367 aaKnown RBP9.67□□□□□ -0.86
PDGFD-202ENST00000393158 FAM69AQ5T7M9 428 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 SLC6A19Q695T7 634 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 ASB18Q6ZVZ8 466 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 OAFQ86UD1 273 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 SIAH3Q8IW03 269 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 TMEM156Q8N614 296 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 CLEC1AQ8NC01 280 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 ELOA3Q8NG57 546 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 HPS1Q92902 700 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 TAAR6Q96RI8 345 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 TSSK6Q9BXA6 273 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 AMBNQ9NP70 447 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 MRPL39Q9NYK5 338 aaKnown RBP9.67□□□□□ -0.86
PDGFD-202ENST00000393158 MYRFQ9Y2G1 1151 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 TRIM64BA6NI03 449 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 CBR3O75828 277 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 PPP1R3DO95685 299 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 OPN1LWP04000 364 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 GP2P55259 537 aaKnown RBP9.67□□□□□ -0.86
PDGFD-202ENST00000393158 TUBA1BP68363 451 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 IL1RL1Q01638 556 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 EMX1Q04741 257 aaPredicted RBP9.67□□□□□ -0.86
PDGFD-202ENST00000393158 LYPD4Q6UWN0 246 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 PLXDC2Q6UX71 529 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 TUBA1AQ71U36 451 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 FGD2Q7Z6J4 655 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 ZNF555Q8NEP9 628 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 OR1J4Q8NGS1 313 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 ZNF563Q8TA94 476 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 FAR1Q8WVX9 515 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 TRUB1Q8WWH5 349 aaKnown RBP9.67□□□□□ -0.86
PDGFD-202ENST00000393158 RASD2Q96D21 266 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 TMEM5Q9Y2B1 443 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 SHANK1Q9Y566 2161 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 CCNA2P20248 432 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 GRK5P34947 590 aa9.67□□□□□ -0.86
PDGFD-202ENST00000393158 CLDN18P56856 261 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms