RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ZNF517Q6ZMY9 492 aaPredicted RBP23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 AGAP4Q96P64 663 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 FKRPQ9H9S5 495 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 RASD1Q9Y272 281 aa23.26■■□□□ 1.31
SMARCD3-203ENST00000392811 LY6G6EA0A0G2JKS1 128 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 CDC40O60508 579 aaKnown RBP eCLIP23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 SERPINA3P01011 423 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 HIST1H2ABP04908 130 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 PNLIPP16233 465 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 PGCP20142 388 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 GRPRP30550 384 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 RIN1Q13671 783 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 NR0B2Q15466 257 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 RPL22L1Q6P5R6 122 aaKnown RBP23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 HIST3H2AQ7L7L0 130 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 RABEPKQ7Z6M1 372 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 UBQLNLQ8IYU4 475 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 ZNF511Q8NB15 262 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 HIST1H2ACQ93077 130 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 KCTD12Q96CX2 325 aaKnown RBP23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 DNAJA3Q96EY1 480 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 TSPAN32Q96QS1 320 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 DUSP23Q9BVJ7 150 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 FSCN3Q9NQT6 498 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 GRHPRQ9UBQ7 328 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 U3KQA8 63 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 TRBV2A0A0J9YWF9 115 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 A0A1W2PPC1 479 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 FADS1O60427 444 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 TIAF1O95411 115 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 HLA-DQB1P01920 261 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 BGLAPP02818 100 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 EDNRAP25101 427 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 EVI2BP34910 448 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 PSMB10P40306 273 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 HSF2Q03933 536 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 C1QL3Q5VWW1 255 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 RAB43Q86YS6 212 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 MRPL48Q96GC5 212 aaKnown RBP23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 MESP1Q9BRJ9 268 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 TTYH2Q9BSA4 534 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 RXFP3Q9NSD7 469 aa23.25■■□□□ 1.31
SMARCD3-203ENST00000392811 GP1BBP13224 206 aa23.24■■□□□ 1.31
SMARCD3-203ENST00000392811 RPS11P62280 158 aaKnown RBP eCLIP23.24■■□□□ 1.31
SMARCD3-203ENST00000392811 RNF4P78317 190 aa23.24■■□□□ 1.31
SMARCD3-203ENST00000392811 ACY1Q03154 408 aa23.24■■□□□ 1.31
SMARCD3-203ENST00000392811 MESTQ5EB52 335 aa23.24■■□□□ 1.31
SMARCD3-203ENST00000392811 TRIQKQ629K1 86 aa23.24■■□□□ 1.31
SMARCD3-203ENST00000392811 UBALD2Q8IYN6 164 aa23.24■■□□□ 1.31
SMARCD3-203ENST00000392811 OR6C1Q96RD1 312 aa23.24■■□□□ 1.31
SMARCD3-203ENST00000392811 MMP28Q9H239 520 aa23.24■■□□□ 1.31
SMARCD3-203ENST00000392811 EXTL2Q9UBQ6 330 aa23.24■■□□□ 1.31
SMARCD3-203ENST00000392811 IGLV3-12A0A075B6K2 115 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 A0A1W2PPK0 400 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 A0A1W2PQM1 296 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 PRR32B1ATL7 298 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 H7C1C5 153 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 LCN6P62502 163 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 CCL7P80098 99 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 SQSTM1Q13501 440 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 CBFBQ13951 182 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 SLC25A35Q3KQZ1 300 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 CCDC58Q4VC31 144 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 EMC4Q5J8M3 183 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 PAMR1Q6UXH9 720 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 UBL7Q96S82 380 aaPredicted RBP23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 SYNDIG1Q9H7V2 258 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 MOKQ9UQ07 419 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 TRAV36DV7A0A075B6V5 113 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 A0A1B0GTQ1 180 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 DCTN6O00399 190 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 SIGLEC6O43699 453 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 CD1AP06126 327 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 ANKRD34CP0C6C1 535 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 C16orf47Q6ZP98 133 aaPredicted RBP23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 UBE2J2Q8N2K1 259 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 SAP25Q8TEE9 199 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 PDCD1LG2Q9BQ51 273 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 NDEL1Q9GZM8 345 aa23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 SRA1Q9HD15 236 aaKnown RBP23.23■■□□□ 1.31
SMARCD3-203ENST00000392811 VCANP13611 3396 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 TRAV1-2A0A0B4J238 106 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 IDSB3KWA1 339 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 PSMD9O00233 223 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 RAB3BP20337 219 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 P2RX1P51575 399 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 QPRTQ15274 297 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 NKAIN1Q4KMZ8 207 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 SLC16A9Q7RTY1 509 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 ANKRD37Q7Z713 158 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 LRRC28Q86X40 367 aaPredicted RBP23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 SAMD12Q8N8I0 201 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 C19orf18Q8NEA5 215 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 PRDM6Q9NQX0 595 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 CYSLTR2Q9NS75 346 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 NPAP1Q9NZP6 1156 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 SPEGQ15772 3267 aa23.22■■□□□ 1.31
SMARCD3-203ENST00000392811 OR6C70A6NIJ9 312 aa23.21■■□□□ 1.31
SMARCD3-203ENST00000392811 TFECO14948 347 aaPredicted RBP23.21■■□□□ 1.31
SMARCD3-203ENST00000392811 EIF4EP06730 217 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms